Concerted evolution in the GAPDH family of retrotransposed pseudogenes

P. Garcia-Meunier; M. Etienne-Julan; Ph. Fort; M. Piechaczyk; F. Bonhomme

doi:10.1007/bf00357792

journal article Dec 01, 1993

Concerted evolution in the GAPDH family of retrotransposed pseudogenes

P. Garcia-Meunier M. Etienne-Julan Ph. Fort M. Piechaczyk F. Bonhomme

Mammalian Genome Vol. 4 No. 12 pp. 695-703 · Springer Science and Business Media LLC

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References

32

[1]

Catzeflis, F.M., Sheldon, F.H., Ahlquist, J.E., Sibley, C.G. (1987). DNA-DNA hybridation evidence of the rapid rate of muroid rodent DNA evolution. Mol. Biol. Evol. 4, 242?253.

[2]

Catzeflis, F.M., Nevo, E., Ahlquist, J.E., Sibley, C.G. (1989). Relationships of the chromosomal species in the eurasian mole rats of the Spalax ehrenbergi group as determined by DNA-DNA hybridization, and an estimate of the Spalacid-Murid divergence time. J. Mol. Evol. 29, 223?232. 10.1007/bf02100206

[3]

Coen, E., Strachan, T., Brown, S., Dover, G. (1983). On the limited independence of chromosome evolution. Kew Chromosome Conference II, George Allen & Unwin.

[4]

Dover, G. (1982). Molecular drive: a cohesive mode of species evolution. Nature 299, 111?117. 10.1038/299111a0

[5]

Dover, G. (1986). Molecular drive in multigene families: how biological novelties arise, spread and are assimilated. Trends Genet. 159?164. 10.1016/0168-9525(86)90211-8

[6]

Dover, G. (1987). DNA turnover of the molecular clock. J. Mol. Evol. 26, 47?58. 10.1007/bf02111281

[7]

Dover, G. (1988). Evolving the improbable. Trends Ecol. Evol. 3, no. 3, 81?84. 10.1016/0169-5347(88)90024-9

[8]

Dover, G. Slips, strings and species, Trends Genet. 5, no. 4, 1989. 10.1016/0168-9525(89)90038-3

[9]

Dover, G., Coen E. (1981). Springcleaning ribosomal DNA: a model for multigene evolution? Nature 290, 731?732. 10.1038/290731a0

[10]

ElSabrouty, S., Blanchard, J.M., Marty, L., Jeanteur, P., Piechaczyk, M. (1989). The Muridae glyceraldehyde 3-phosphate deshydrogenase family. J. Mol. Evol. 29, 212?222. 10.1007/bf02100205

[11]

Fort, P., Marty, L., Piechaczyk, M., Riad-El Sabrouty, S., Dani, C., Jeanteur, P., Blanchard, J.M. (1985). Various rat adult tissues express only one major mRNA species from the glyceraldehyde 3-phosphate deshydrogenase multigenic family. Nucleic Acids Res. 13, 1431?1442. 10.1093/nar/13.5.1431

[12]

Fukasawa, K., Tanimura, M., Sakai, I., Sharief, F., Chung, F-Z., Li, S. (1987). Molecular nature of spontaneous mutations in mouse lactate deshydrogenase-A processed pseudogenes. Genetics 115, 177?184. 10.1093/genetics/115.1.177

[13]

Hanauer, A., Mandel, J.L. (1984). The glyceraldehyde 3-phosphate deshydrogenase gene family: structure of a human cDNA and of an X chromosome linked pseudogene; amazing complexity of the gene family in mouse. EMBO J. 3, 2627?2633. 10.1002/j.1460-2075.1984.tb02185.x

[14]

Jubier-Maurin, V., Dod, B., Bellis, M., Piechaczyk, M., Roizes, G. (1985). Comparative study of the L1 family in the genus Mus: possible role of retroposition and conversion events in its concerted evolution. J. Mol. Biol. 184, 547?564. 10.1016/0022-2836(85)90302-x

[15]

Kricker, M.C., Drake, J.W., Radman, M. (1992). Duplication targeted DNA methylation and mutagenesis in the evolution of eukaryotic chromosomes. Proc. Natl. Acad. Sci. USA 89, 1075?1079. 10.1073/pnas.89.3.1075

[16]

Kunkel, T.A., Bebenk, K. (1988). Recent studies of the fidelity of DNA synthesis. Biochim. Biophys. Acta 951, 1. 10.1016/0167-4781(88)90020-6

[17]

Loeb, L.A., Reyland, M.E. (1987). Fidelity of DNA synthesis. In Nucleic Acids and Molecular Biology, vol. 1. Eckstein, F., Lilley, D., eds. (Berlin: Springer Verlag), p. 157. 10.1007/978-3-642-46596-3_9

[18]

Martin, S., Volida, C., Hardies, S., Edgell, M., Hutchison, C. (1985). Tempo and mode of concerted evolution in the L1 repeat family on mice. Mol. Biol. Evol. 2, 127?140.

[19]

Mazin, A.L., Vaniushin, B.F. (1987). The loss of dinucleotides CpG from DNA. IV. Methylation and divergence of genes and pseudogenes of small nuclear RNA. Mol. Biol. (Mosk) 21, 1099?1109.

[20]

Miyata, T., Yasunaga, T. (1981). Rapidly evolving mouse ?-globin related pseudogene and its evolutionary history. Proc. Natl. Acad. Sci. USA 78, 450?453. 10.1073/pnas.78.1.450

[21]

Nevo, E., Piechaczyk, M. (1989). Deshydrogenase multigene family of mole rat: evolutionary and phylogenetic patterns. Mammalia 53, 296?300. 10.1515/mamm.1989.53.2.295

[22]

Piechaczyk, M., Blanchard, J.M., Riad El Sabrouty, D.C., Marty, L., Jeanteur, P. (1984). Unusual high number of glyceraldehyde 3-phosphate deshydrogenase related sequences in mouse and rat genomes. Nature 312, 469?471. 10.1038/312469a0

[23]

Sabath, D., Broome, H.E., Prystowsky, M.B. (1990). GAPD mRNA is a major interleukine 2-induced transcript in a cloned T helper lymphocyte. Gene 91, 185?191. 10.1016/0378-1119(90)90087-8

[24]

Sambrook, J., Fritsch, E.F., Maniatis, T. (1989). Molecular Cloning, a Laboratory Manual, 2nd ed. (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press).

[25]

DNA sequencing with chain-terminating inhibitors

F. Sanger, S. Nicklen, A. R. Coulson

Proceedings of the National Academy of Sciences 1977 10.1073/pnas.74.12.5463

[26]

She, J.X., Bonhomme, F., Boursot, P., Thaler, L., Catzeflis, F.M. (1991). Molecular phylogenies in the genus Mus: comparative analysis of electrophoretic, scnDNA hybridization and mtDNA RFLP data. Biol. J. Linnean Soc. 41, 83?103. 10.1111/j.1095-8312.1990.tb00823.x

[27]

Sved, J., Bird, A. (1990). The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model. Proc. Natl. Acad. Sci. USA 87, 4692?4696. 10.1073/pnas.87.12.4692

[28]

Tso, J.Y., Sun, X.H., Kao, T.H., Reece, K.S., Wu, R. (1985). Isolation and deshydrogenase cDNAs: genomic complexity and molecular characterisation of rat and human glyceraldehyde 3-phosphate: Evolution of the Gene. Nucleic Acids Res. 13, 2485?2502. 10.1093/nar/13.7.2485

[29]

Vanlerberghe, F., Bonhomme, F., Hutchison III, C.A., Edgell, M.H. (1993). A major difference between the divergence patterns within the lines-1 families in mice and voles. Mol. Biol. Evol. 10, 719?731.

[30]

Vincent, S., Jeanteur, P., Fort, P. (1990). Nucleotide sequence of hamster glyceraldehyde 3-phosphate deshydrogenase mRNA. Nucleic Acids Res. 10, 3054. 10.1093/nar/18.10.3054

[31]

Wilcoxon, F. (1945). Individual comparisons by ranking methods Biometrics Bull. 1, 80?83. 10.2307/3001968

[32]

Yanish-Perron, C., Viera, J., Messing, J. (1985). Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33, 109?119.

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Published: Dec 01, 1993
Vol/Issue: 4(12)
Pages: 695-703
License: View

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Cite This Article

P. Garcia-Meunier, M. Etienne-Julan, Ph. Fort, et al. (1993). Concerted evolution in the GAPDH family of retrotransposed pseudogenes. Mammalian Genome, 4(12), 695-703. https://doi.org/10.1007/bf00357792

Concerted evolution in the GAPDH family of retrotransposed pseudogenes

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