journal article Open Access Sep 01, 2014

H3K36 Histone Methyltransferase Setd2 Is Required for Murine Embryonic Stem Cell Differentiation toward Endoderm

Cell Reports Vol. 8 No. 6 pp. 1989-2002 · Elsevier BV
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References
53
[1]
Ang "Wdr5 mediates self-renewal and reprogramming via the embryonic stem cell core transcriptional network" Cell (2011) 10.1016/j.cell.2011.03.003
[2]
High-Resolution Profiling of Histone Methylations in the Human Genome

Artem Barski, Suresh Cuddapah, Kairong Cui et al.

Cell 2007 10.1016/j.cell.2007.05.009
[3]
Bernstein "A bivalent chromatin structure marks key developmental genes in embryonic stem cells" Cell (2006) 10.1016/j.cell.2006.02.041
[4]
SetDB1 contributes to repression of genes encoding developmental regulators and maintenance of ES cell state

Steve Bilodeau, Michael H. Kagey, Garrett M. Frampton et al.

Genes & Development 2009 10.1101/gad.1837309
[5]
Canham "Functional heterogeneity of embryonic stem cells revealed through translational amplification of an early endodermal transcript" PLoS Biol. (2010) 10.1371/journal.pbio.1000379
[6]
Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic Transcription

Michael J. Carrozza, Bing Li, Laurence Florens et al.

Cell 2005 10.1016/j.cell.2005.10.023
[7]
Carvalho "Histone methyltransferase SETD2 coordinates FACT recruitment with nucleosome dynamics during transcription" Nucleic Acids Res. (2013) 10.1093/nar/gks1472
[8]
Chen "Fibroblast growth factor (FGF) signaling through PI 3-kinase and Akt/PKB is required for embryoid body differentiation" Oncogene (2000) 10.1038/sj.onc.1203726
[9]
Chen "Integration of external signaling pathways with the core transcriptional network in embryonic stem cells" Cell (2008) 10.1016/j.cell.2008.04.043
[10]
Cheng "Mammalian Grb2 regulates multiple steps in embryonic development and malignant transformation" Cell (1998) 10.1016/s0092-8674(00)81702-x
[12]
Cuiffo "Palmitoylation of oncogenic NRAS is essential for leukemogenesis" Blood (2010) 10.1182/blood-2009-03-213876
[13]
Dalgliesh "Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes" Nature (2010) 10.1038/nature08672
[14]
de Almeida "Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36" Nat. Struct. Mol. Biol. (2011) 10.1038/nsmb.2123
[15]
Duns "Histone methyltransferase gene SETD2 is a novel tumor suppressor gene in clear cell renal cell carcinoma" Cancer Res. (2010) 10.1158/0008-5472.can-10-0120
[16]
Efroni "Global transcription in pluripotent embryonic stem cells" Cell Stem Cell (2008) 10.1016/j.stem.2008.03.021
[17]
Fazzio "An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity" Cell (2008) 10.1016/j.cell.2008.05.031
[18]
Ferrari "Polycomb-dependent H3K27me1 and H3K27me2 regulate active transcription and enhancer fidelity" Mol. Cell (2014) 10.1016/j.molcel.2013.10.030
[19]
Frankenberg "Primitive endoderm differentiates via a three-step mechanism involving Nanog and RTK signaling" Dev. Cell (2011) 10.1016/j.devcel.2011.10.019
[20]
Gaspar-Maia "Chd1 regulates open chromatin and pluripotency of embryonic stem cells" Nature (2009) 10.1038/nature08212
[21]
Hamazaki "The Grb2/Mek pathway represses Nanog in murine embryonic stem cells" Mol. Cell. Biol. (2006) 10.1128/mcb.00508-06
[22]
Hu "Histone H3 lysine 36 methyltransferase Hypb/Setd2 is required for embryonic vascular remodeling" Proc. Natl. Acad. Sci. USA (2010) 10.1073/pnas.0915033107
[23]
Jiang "Role for Dpy-30 in ES cell-fate specification by regulation of H3K4 methylation within bivalent domains" Cell (2011) 10.1016/j.cell.2011.01.020
[24]
DNA Methylation and SETDB1/H3K9me3 Regulate Predominantly Distinct Sets of Genes, Retroelements, and Chimeric Transcripts in mESCs

Mohammad M. Karimi, Preeti Goyal, Irina A. Maksakova et al.

Cell Stem Cell 2011 10.1016/j.stem.2011.04.004
[25]
Cotranscriptional Set2 Methylation of Histone H3 Lysine 36 Recruits a Repressive Rpd3 Complex

Michael-Christopher Keogh, Siavash K. Kurdistani, Stephanie A. Morris et al.

Cell 2005 10.1016/j.cell.2005.10.025
[26]
Kolasinska-Zwierz "Differential chromatin marking of introns and expressed exons by H3K36me3" Nat. Genet. (2009) 10.1038/ng.322
[27]
Kunath "FGF stimulation of the Erk1/2 signalling cascade triggers transition of pluripotent embryonic stem cells from self-renewal to lineage commitment" Development (2007) 10.1242/dev.02880
[28]
Li "Association of the histone methyltransferase Set2 with RNA polymerase II plays a role in transcription elongation" J. Biol. Chem. (2002) 10.1074/jbc.m209294200
[29]
Li "Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription" Genes Dev. (2007) 10.1101/gad.1539307
[30]
Li "Stk40 links the pluripotency factor Oct4 to the Erk/MAPK pathway and controls extraembryonic endoderm differentiation" Proc. Natl. Acad. Sci. USA (2010) 10.1073/pnas.0905657107
[31]
Li "The histone acetyltransferase MOF is a key regulator of the embryonic stem cell core transcriptional network" Cell Stem Cell (2012) 10.1016/j.stem.2012.04.023
[32]
Li "The histone mark H3K36me3 regulates human DNA mismatch repair through its interaction with MutSα" Cell (2013) 10.1016/j.cell.2013.03.025
[33]
Liu "Activity-regulated, cytoskeleton-associated protein (Arc) is essential for visceral endoderm organization during early embryogenesis" Mech. Dev. (2000) 10.1016/s0925-4773(99)00340-8
[34]
Loh "Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells" Genes Dev. (2007) 10.1101/gad.1588207
[35]
Luco "Regulation of alternative splicing by histone modifications" Science (2010) 10.1126/science.1184208
[36]
Mao "Identification of genes expressed in human CD34(+) hematopoietic stem/progenitor cells by expressed sequence tags and efficient full-length cDNA cloning" Proc. Natl. Acad. Sci. USA (1998) 10.1073/pnas.95.14.8175
[37]
Mar "Mutations in epigenetic regulators including SETD2 are gained during relapse in paediatric acute lymphoblastic leukaemia" Nat Commun (2014) 10.1038/ncomms4469
[38]
Martin "The diverse functions of histone lysine methylation" Nat. Rev. Mol. Cell Biol. (2005) 10.1038/nrm1761
[39]
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Tarjei S. Mikkelsen, Manching Ku, David B. Jaffe et al.

Nature 2007 10.1038/nature06008
[40]
Niwa "Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells" Nat. Genet. (2000) 10.1038/74199
[41]
Pasini "The polycomb group protein Suz12 is required for embryonic stem cell differentiation" Mol. Cell. Biol. (2007) 10.1128/mcb.01432-06
[42]
Peng "Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells" Cell (2009) 10.1016/j.cell.2009.12.002
[43]
Reynolds "NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment" Cell Stem Cell (2012) 10.1016/j.stem.2012.02.020
[44]
Shen "Jumonji modulates polycomb activity and self-renewal versus differentiation of stem cells" Cell (2009) 10.1016/j.cell.2009.12.003
[45]
Smith "Myc represses primitive endoderm differentiation in pluripotent stem cells" Cell Stem Cell (2010) 10.1016/j.stem.2010.06.023
[46]
Strahl "Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression" Mol. Cell. Biol. (2002) 10.1128/mcb.22.5.1298-1306.2002
[47]
Sun "Identification and characterization of a novel human histone H3 lysine 36-specific methyltransferase" J. Biol. Chem. (2005) 10.1074/jbc.m504012200
[48]
Venkatesh "Set2 methylation of histone H3 lysine 36 suppresses histone exchange on transcribed genes" Nature (2012) 10.1038/nature11326
[49]
Williams "Myeloid leukaemia inhibitory factor maintains the developmental potential of embryonic stem cells" Nature (1988) 10.1038/336684a0
[50]
Xie "KDM5B regulates embryonic stem cell self-renewal and represses cryptic intragenic transcription" EMBO J. (2011) 10.1038/emboj.2011.91

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Shaping the cellular landscape with Set2/SETD2 methylation

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Published
Sep 01, 2014
Vol/Issue
8(6)
Pages
1989-2002
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Cite This Article
Yuanliang Zhang, Shugao Xie, Yan Zhou, et al. (2014). H3K36 Histone Methyltransferase Setd2 Is Required for Murine Embryonic Stem Cell Differentiation toward Endoderm. Cell Reports, 8(6), 1989-2002. https://doi.org/10.1016/j.celrep.2014.08.031
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