Cryptic species complex or an incomplete speciation? Phylogeographic analysis reveals an intricate Pleistocene history of Priapulus caudatus Lamarck, 1816

Glafira Kolbasova; Andreas Schmidt-Rhaesa; Vitaly Syomin; Danila Bredikhin; Taras Morozov; Tatiana Neretina

doi:10.1016/j.jcz.2022.11.013

journal article Open Access Jan 01, 2023

Cryptic species complex or an incomplete speciation? Phylogeographic analysis reveals an intricate Pleistocene history of Priapulus caudatus Lamarck, 1816

Glafira Kolbasova Andreas Schmidt-Rhaesa Vitaly Syomin Danila Bredikhin

Taras Morozov Tatiana Neretina

Zoologischer Anzeiger Vol. 302 pp. 113-130 · Elsevier BV

View at Publisher Save 10.1016/j.jcz.2022.11.013

Topics

No keywords indexed for this article. Browse by subject →

References

96

[1]

Adrianov (1996)

[2]

Adrianov (1999)

[3]

Anderson "Last Interglacial Arctic warmth confirms polar amplification of climate change" Quat. Sci. Rev. (2006) 10.1016/j.quascirev.2006.01.033

[4]

Astakhov "Middle Pleistocene glaciations of the Russian north" Quat. Sci. Rev. (2004) 10.1016/j.quascirev.2003.12.011

[5]

Astakhov "Evidence of late Pleistocene ice‐dammed lakes in west Siberia" Boreas (2006)

[6]

Astakhov "Ice margins of northern Russia revisited" Develop. Quatern. Sci. (2011)

[7]

Astakhov "The penultimate interglaciation of northern Russia" Quat. Int. (2021) 10.1016/j.quaint.2020.12.034

[8]

Avise "A speciational history of “living fossils”: molecular evolutionary patterns in horseshoe crabs" Evolution (1994)

[9]

Baranskaya "A postglacial relative sea-level database for the Russian Arctic coast" Quat. Sci. Rev. (2018) 10.1016/j.quascirev.2018.07.033

[10]

Blouin "Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics" Mol. Biol. Evol. (1998) 10.1093/oxfordjournals.molbev.a025898

[11]

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

Remco Bouckaert, Joseph Heled, Denise Kühnert et al.

PLOS Computational Biology 2014 10.1371/journal.pcbi.1003537

[12]

Bowen "Sea level 400 000 years ago (MIS 11): analogue for present and future sea-level?" Clim. Past (2010) 10.5194/cp-6-19-2010

[13]

Brigham-Grette "Pliocene marine transgressions of northern Alaska: circumarctic correlations and paleoclimatic interpretations" Arctic (1992)

[14]

Burkovsky "The importance of juveniles in structuring a littoral macrobenthic community" Hydrobiologia (1997) 10.1023/a:1003075423171

[15]

Cherneva "Species identity and genetic structure of nemerteans of the “Lineus ruber-viridis” complex (Muller, 1774) from Arctic waters" Polar Biol. (2019) 10.1007/s00300-018-2438-7

[16]

Clement "TCS: estimating gene genealogies" Par Distr Proc Symp Int (2002)

[17]

Combosch "Genomic signatures of evolution in Nautilus – an endangered living fossil" Mol. Ecol. (2017) 10.1111/mec.14344

[18]

Cox "Geomagnetic polarity epochs: pribilof islands" Geol. Soc. Am. Bull. (1966) 10.1130/0016-7606(1966)77[883:gpepia]2.0.co;2

[19]

Derycke "Seasonal dynamics of population genetic structure in cryptic taxa of the Pellioditis marina complex (Nematoda: rhabditida)" Genetica (2005)

[20]

Derycke "Exploring the use of cytochrome oxidase c Subunit 1 (COI) for DNA barcoding of free-living marine nematodes" PLoS One (2010) 10.1371/journal.pone.0013716

[21]

Dodson "Trans‐Arctic dispersals and the evolution of a circumpolar marine fish species complex, the capelin (Mallotus villosus)" Mol. Ecol. (2007) 10.1111/j.1365-294x.2007.03559.x

[22]

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar

Nucleic Acids Research 2004 10.1093/nar/gkh340

[23]

Edler (2019)

[24]

Ekimova "Diet-driven ecological radiation and allopatric speciation result in high species diversity in a temperate-cold water marine genus Dendronotus (Gastropoda: nudibranchia)" Mol. Phylogenet. Evol. (2019) 10.1016/j.ympev.2019.106609

[25]

Farquharson "Alaskan marine transgressions record out-of-phase Arctic Ocean glaciation during the last interglacial" Geol. (2018) 10.1130/g40345.1

[26]

Fontaneto "Guidelines for DNA taxonomy, with a focus on the meiofauna" Mar. Biodivers. (2015) 10.1007/s12526-015-0319-7

[27]

Fu "Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection" Genetics (1997) 10.1093/genetics/147.2.915

[28]

Funk "Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA" Annu. Rev. Ecol. Evol. Syst. (2003) 10.1146/annurev.ecolsys.34.011802.132421

[29]

Geller "Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all‐taxa biotic surveys" Mol. Ecol. Res. (2013) 10.1111/1755-0998.12138

[30]

Giribet "First molecular evidence for the existence of a Tardigrada+Arthropoda clade" Mol. Biol. Evol. (1996) 10.1093/oxfordjournals.molbev.a025573

[31]

Giribet "Internal phylogeny of the Chilopoda (Myriapoda, Arthropoda) using complete 18S DNA and partial 28S DNA sequences" Phil. Trans. R. Soc. Ser. B. (1999) 10.1098/rstb.1999.0373

[32]

Gladenkov "Onset of connections between the pacific and arctic oceans through the Bering Strait in the neogene" Stratigr. Geol. Correl. (2004)

[33]

Gladenkov "A refined age for the earliest opening of Bering Strait" Palaeogeogr. Palaeoclimatol. Palaeoecol. (2002) 10.1016/s0031-0182(02)00249-3

[34]

Glez-Peña "ALTER: program-oriented format conversion of DNA and protein alignments" Nucleic Acids Research. Web Server issue (2010) 10.1093/nar/gkq321

[35]

Hallas "Dating and biogeographical patterns in the sea slug genus Acanthodoris Gray, 1850 (Mollusca, Gastropoda, Nudibranchia)" Mol. Phylogenet. Evol. (2016) 10.1016/j.ympev.2015.12.018

[36]

Hanelt "Cryptic species of hairworm parasites revealed by molecular data and crowdsourcing of specimen collections" Mol. Phylogenet. Evol. (2015) 10.1016/j.ympev.2014.09.010

[37]

Hiruta "A matter of persistence: differential Late Pleistocene survival of two rocky-shore idoteid isopod species in northern Japan" Hydrobiol. (Sofia) (2017) 10.1007/s10750-017-3209-0

[38]

Ho "Biogeographic calibrations for the molecular clock" Biol. Lett. (2015) 10.1098/rsbl.2015.0194

[39]

Hopkins "Cenozoic history of the bering" Land Bridge: Sci. (1959)

[40]

Hopkins (1967)

[41]

Hopkins "Quaternary marine transgression in Alaska" (1967)

[42]

Hopkins "The paleogeography and climatic history of Beringia during late Cenozoic time: Internord" Rev. Int. D’et. Arct. Nord. (1972)

[43]

Hopkins (1976)

[44]

Hopkins "Quaternary correlations across Bering Strait" Sci (1965) 10.1126/science.147.3662.1107

[45]

Hopkins "Middle Pleistocene mollusks from st. Lawrence Island and their significance for the paleooceanography of the bering sea" Quat. Res. (1972) 10.1016/0033-5894(72)90033-6

[46]

Horikawa "Pliocene cooling enhanced by flow of low-salinity Bering Sea water to the Arctic Ocean" Nat. Commun. (2015) 10.1038/ncomms8587

[47]

Hudson "Stochasticity overrules the "three-times rule": genetic drift, genetic draft, and coalescence times for nuclear loci versus mitochondrial DNA" Evolution (2003)

[48]

Hupalo (2022)

[49]

Ivanov "Mitonuclear discordance in wolf spiders: Genomic evidence for species integrity and introgression" Mol. Ecol. (2018) 10.1111/mec.14564

[50]

Jörger "How to describe a cryptic species? Practical challenges of molecular taxonomy" Front. Zool. (2013) 10.1186/1742-9994-10-59

Showing 50 of 96 references

Metrics

14

Citations

96

References

Details

Published: Jan 01, 2023
Vol/Issue: 302
Pages: 113-130
License: View

Authors

G

Glafira Kolbasova

A

Andreas Schmidt-Rhaesa

Funding

Russian Science Foundation

Cite This Article

Glafira Kolbasova, Andreas Schmidt-Rhaesa, Vitaly Syomin, et al. (2023). Cryptic species complex or an incomplete speciation? Phylogeographic analysis reveals an intricate Pleistocene history of Priapulus caudatus Lamarck, 1816. Zoologischer Anzeiger, 302, 113-130. https://doi.org/10.1016/j.jcz.2022.11.013

Cryptic species complex or an incomplete speciation? Phylogeographic analysis reveals an intricate Pleistocene history of Priapulus caudatus Lamarck, 1816

You May Also Like