Biofilm Matrixome: Extracellular Components in Structured Microbial Communities

L. Karygianni; Z. Ren; H. Koo; T. Thurnheer

doi:10.1016/j.tim.2020.03.016

journal article Open Access Aug 01, 2020

Biofilm Matrixome: Extracellular Components in Structured Microbial Communities

L. Karygianni Z. Ren

H. Koo

T. Thurnheer

Trends in Microbiology Vol. 28 No. 8 pp. 668-681 · Elsevier BV

View at Publisher Save 10.1016/j.tim.2020.03.016

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References

100

[1]

Biofilms: an emergent form of bacterial life

Hans-Curt Flemming, Jost Wingender, Ulrich Szewzyk et al.

Nature Reviews Microbiology 2016 10.1038/nrmicro.2016.94

[2]

Koo "Dynamic cell-matrix interactions modulate microbial biofilm and tissue 3D microenvironments" Curr. Opin. Cell Biol. (2016) 10.1016/j.ceb.2016.05.005

[3]

Dragos "The peculiar functions of the bacterial extracellular matrix" Trends Microbiol. (2017) 10.1016/j.tim.2016.12.010

[4]

Targeting microbial biofilms: current and prospective therapeutic strategies

Hyun Koo, Raymond N. Allan, Robert P. Howlin et al.

Nature Reviews Microbiology 2017 10.1038/nrmicro.2017.99

[5]

Oral Biofilms: Pathogens, Matrix, and Polymicrobial Interactions in Microenvironments

William H. Bowen, Robert A. Burne, Hui Wu et al.

Trends in Microbiology 2018 10.1016/j.tim.2017.09.008

[6]

Marsh "Influence of saliva on the oral microbiota" Periodontology (2016) 10.1111/prd.12098

[7]

Studies on the Formation of Crystalline Bacterial Biofilms on Urethral Catheters

D. J. Stickler, N. Morris, M.-C. Moreno et al.

European Journal of Clinical Microbiology & In... 1998 10.1007/s100960050150

[8]

Keren-Paz "Micro-CT X-ray imaging exposes structured diffusion barriers within biofilms" NPJ Biofilms Microbiomes (2018) 10.1038/s41522-018-0051-8

[9]

Oppenheimer-Shaanan "Spatio-temporal assembly of functional mineral scaffolds within microbial biofilms" NPJ Biofilms Microbiomes (2016) 10.1038/npjbiofilms.2015.31

[10]

Dade-Robertson "Architects of nature: growing buildings with bacterial biofilms" Microb. Biotechnol. (2017) 10.1111/1751-7915.12833

[11]

Li "Spatial patterns of carbonate biomineralization in biofilms" Appl. Environ. Microbiol. (2015) 10.1128/aem.01585-15

[12]

van Gestel "From cell differentiation to cell collectives: Bacillus subtilis uses division of labor to migrate" PLoS Biol. (2015) 10.1371/journal.pbio.1002141

[13]

Angelini "Bacillus subtilis spreads by surfing on waves of surfactant" Proc. Natl. Acad. Sci. U. S. A. (2009) 10.1073/pnas.0905890106

[14]

Grau "A duo of potassium-responsive histidine kinases govern the multicellular destiny of Bacillus subtilis" mBio (2015) 10.1128/mbio.00581-15

[15]

Ogran "The plant host induces antibiotic production to select the most-beneficial colonizers" Appl. Environ. Microbiol. (2019) 10.1128/aem.00512-19

[16]

Hobley "Giving structure to the biofilm matrix: an overview of individual strategies and emerging common themes" FEMS Microbiol. Rev. (2015) 10.1093/femsre/fuv015

[17]

Peterson "Viscoelasticity of biofilms and their recalcitrance to mechanical and chemical challenges" FEMS Microbiol. Rev. (2015) 10.1093/femsre/fuu008

[18]

Zarnowski "Novel entries in a fungal biofilm matrix encyclopedia" mBio (2014) 10.1128/mbio.01333-14

[19]

Teschler "Living in the matrix: assembly and control of Vibrio cholerae biofilms" Nat. Rev. Microbiol. (2015) 10.1038/nrmicro3433

[20]

Sticking together: building a biofilm the Bacillus subtilis way

Hera Vlamakis, Yunrong Chai, Pascale Beauregard et al.

Nature Reviews Microbiology 2013 10.1038/nrmicro2960

[21]

Jones "Psl produced by mucoid Pseudomonas aeruginosa contributes to the establishment of biofilms and immune evasion" mBio (2017) 10.1128/mbio.00864-17

[22]

Harimawan "Investigation of extracellular polymeric substances (EPS) properties of P. aeruginosa and B. subtilis and their role in bacterial adhesion" Colloids Surf. B Biointerf. (2016) 10.1016/j.colsurfb.2016.06.039

[23]

Toska "Exopolysaccharide protects Vibrio cholerae from exogenous attacks by the type 6 secretion system" Proc. Natl. Acad. Sci. U. S. A. (2018) 10.1073/pnas.1808469115

[24]

Yan "Vibrio cholerae biofilm growth program and architecture revealed by single-cell live imaging" Proc. Natl. Acad. Sci. U. S. A. (2016) 10.1073/pnas.1611494113

[25]

Hotterbeekx "In vivo and in vitro interactions between Pseudomonas aeruginosa and Staphylococcus spp" Front. Cell. Infect. Microbiol. (2017) 10.3389/fcimb.2017.00106

[26]

Xiao "The exopolysaccharide matrix modulates the interaction between 3D architecture and virulence of a mixed-species oral biofilm" PLoS Pathog. (2012) 10.1371/journal.ppat.1002623

[27]

Berk "Molecular architecture and assembly principles of Vibrio cholerae biofilms" Science (2012) 10.1126/science.1222981

[28]

Drescher "Architectural transitions in Vibrio cholerae biofilms at single-cell resolution" Proc. Natl. Acad. Sci. U. S. A. (2016) 10.1073/pnas.1601702113

[29]

Wang "Emergent properties in Streptococcus mutans biofilms are controlled through adhesion force sensing by initial colonizers" mBio (2019) 10.1128/mbio.01908-19

[30]

Falsetta "Symbiotic relationship between Streptococcus mutans and Candida albicans synergizes virulence of plaque biofilms in vivo" Infect. Immun. (2014) 10.1128/iai.00087-14

[31]

Hwang "Candida albicans mannans mediate Streptococcus mutans exoenzyme GtfB binding to modulate cross-kingdom biofilm development in vivo" PLoS Pathog. (2017) 10.1371/journal.ppat.1006407

[32]

Duanis-Assaf "Cell wall associated protein TasA provides an initial binding component to extracellular polysaccharides in dual-species biofilm" Sci. Rep. (2018) 10.1038/s41598-018-27548-1

[33]

Jayathilake "Extracellular polymeric substance production and aggregated bacteria colonization influence the competition of microbes in biofilms" Front. Microbiol. (2017) 10.3389/fmicb.2017.01865

[34]

Erskine "Functional amyloid and other protein fibers in the biofilm matrix" J. Mol. Biol. (2018) 10.1016/j.jmb.2018.07.026

[35]

Sullan "Binding forces of Streptococcus mutans P1 adhesin" ACS Nano (2015) 10.1021/nn5058886

[36]

Romero "Amyloid fibers provide structural integrity to Bacillus subtilis biofilms" Proc. Natl. Acad. Sci. U. S. A. (2010) 10.1073/pnas.0910560107

[37]

Dueholm "Functional amyloid in Pseudomonas" Mol. Microbiol. (2010) 10.1111/j.1365-2958.2010.07269.x

[38]

Taglialegna "Staphylococcal Bap proteins build amyloid scaffold biofilm matrices in response to environmental signals" PLoS Pathog. (2016) 10.1371/journal.ppat.1005711

[39]

Turnbull "Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms" Nat. Commun. (2016) 10.1038/ncomms11220

[40]

Reichhardt "Confocal laser scanning microscopy for analysis of Pseudomonas aeruginosa biofilm architecture and matrix localization" Front. Microbiol. (2019) 10.3389/fmicb.2019.00677

[41]

Hou "Extracellular polymeric matrix production and relaxation under fluid shear and mechanical pressure in Staphylococcus aureus biofilms" Appl. Environ. Microbiol. (2018) 10.1128/aem.01516-17

[42]

Karygianni "Novel broad-spectrum antimicrobial photoinactivation of in situ oral biofilms by visible light plus water-filtered infrared A" Appl. Environ. Microbiol. (2014) 10.1128/aem.02490-14

[43]

Molecular mechanisms of biofilm-based antibiotic resistance and tolerance in pathogenic bacteria

Clayton W. Hall, Thien-Fah Mah

FEMS Microbiology Reviews 2017 10.1093/femsre/fux010

[44]

Kong "Commensal protection of Staphylococcus aureus against antimicrobials by Candida albicans biofilm matrix" mBio (2016) 10.1128/mbio.01365-16

[45]

Kean "Candida albicans mycofilms support Staphylococcus aureus colonization and enhances miconazole resistance in dual-species interactions" Front. Microbiol. (2017) 10.3389/fmicb.2017.00258

[46]

Kim "Bacterial-derived exopolysaccharides enhance antifungal drug tolerance in a cross-kingdom oral biofilm" ISME J. (2018) 10.1038/s41396-018-0113-1

[47]

Townsend "Implications of antimicrobial combinations in complex wound biofilms containing fungi" Antimicrob. Agents Chemother. (2017) 10.1128/aac.00672-17

[48]

Townsend "Development and characterisation of a novel three-dimensional inter-kingdom wound biofilm model" Biofouling (2016) 10.1080/08927014.2016.1252337

[49]

Arnaouteli "Bifunctionality of a biofilm matrix protein controlled by redox state" Proc. Natl. Acad. Sci. U. S. A. (2017) 10.1073/pnas.1707687114

[50]

Morris "Natural variations in the biofilm-associated protein BslA from the genus Bacillus" Sci. Rep. (2017) 10.1038/s41598-017-06786-9

Showing 50 of 100 references

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Details

Published: Aug 01, 2020
Vol/Issue: 28(8)
Pages: 668-681
License: View

Authors

Oral Microbiology and Immunology Institute of Oral Biology Center of Dental Medicine University of Zürich Zürich Switzerland

Cite This Article

L. Karygianni, Z. Ren, H. Koo, et al. (2020). Biofilm Matrixome: Extracellular Components in Structured Microbial Communities. Trends in Microbiology, 28(8), 668-681. https://doi.org/10.1016/j.tim.2020.03.016

Biofilm Matrixome: Extracellular Components in Structured Microbial Communities

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