Determination of vertical and horizontal assemblage drivers of bacterial community in a heavily polluted urban river

Wenlong Zhang; Mengting Lei; Yi Li; Peifang Wang; Chao Wang; Yu Gao; Hainan Wu; Chen Xu; Lihua Niu; Longfei Wang; Huanjun Zhang

doi:10.1016/j.watres.2019.05.107

journal article Sep 01, 2019

Determination of vertical and horizontal assemblage drivers of bacterial community in a heavily polluted urban river

Wenlong Zhang

Mengting Lei Yi Li

Peifang Wang

Chao Wang

Yu Gao

Hainan Wu Chen Xu

Lihua Niu Longfei Wang

Huanjun Zhang

Water Research Vol. 161 pp. 98-107 · Elsevier BV

View at Publisher Save 10.1016/j.watres.2019.05.107

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References

53

[1]

Azam "Microbial control of oceanic carbon flux: the plot thickens" Science (1998) 10.1126/science.280.5364.694

[2]

Azam "Bacteria-organic matter coupling and its significance for oceanic carbon cycling" Microb. Ecol. (1994) 10.1007/bf00166806

[3]

Partitioning the turnover and nestedness components of beta diversity

Andrés Baselga

Global Ecology and Biogeography 2010 10.1111/j.1466-8238.2009.00490.x

[4]

Baselga "Determinants of species richness, endemism and turnover in European longhorn beetles" Ecography (2008) 10.1111/j.0906-7590.2008.5335.x

[5]

Besemer "Sources and composition of organic matter for bacterial growth in a large European river floodplain system (Danube, Austria)" Org. Geochem. (2009) 10.1016/j.orggeochem.2008.12.005

[6]

Boeer "Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands" Int. Soc. Microb. Ecol. J. (2009)

[7]

Cai "Vertical distribution and assemblages of microbial communities and their potential effects on sulfur metabolism in a black-odor urban river" J. Environ. Manag. (2019)

[8]

Cai "Revealing the relationship between microbial community structure in natural biofilms and the pollution level in urban rivers: a case study in the Qinhuai River basin, Yangtze River Delta" Water Sci. Technol. (2016) 10.2166/wst.2016.224

[9]

Chase "Using null models to disentangle variation in community dissimilarity from variation in alpha-diversity" Ecosphere (2011) 10.1890/es10-00117.1

[10]

Chave "Neutral theory and community ecology" Ecol. Lett. (2004) 10.1111/j.1461-0248.2003.00566.x

[11]

Chen "Bacterial communities in riparian sediments: a large-scale longitudinal distribution pattern and response to dam construction" Front. Microbiol. (2018)

[12]

Chen "Different pollutant removal efficiencies of artificial aquatic plants in black-odor rivers" Environ. Sci. Pollut. Res. Int. (2018)

[13]

Mechanisms of Maintenance of Species Diversity

Peter Chesson

Annual Review of Ecology and Systematics 2000 10.1146/annurev.ecolsys.31.1.343

[14]

Non‐parametric multivariate analyses of changes in community structure

K. R. CLARKE

Australian Journal of Ecology 1993 10.1111/j.1442-9993.1993.tb00438.x

[15]

Diehl "Phytoplankton, light, and nutrients in a gradient of mixing depths: theory" Ecology (2002) 10.1890/0012-9658(2002)083[0386:plania]2.0.co;2

[16]

Dini-Andreote "Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession" Proc. Natl. Acad. Sci. U.S.A. (2015) 10.1073/pnas.1414261112

[17]

Esteves "Abiotic features of a river from the upper Tietê river basin (SP, Brazil) along an environmental gradient" Acta Limnol. Bras. (2015) 10.1590/s2179-975x5914

[18]

Fargione "Community assembly and invasion: an experimental test of neutral versus niche processes" Proc. Natl. Acad. Sci. U.S.A. (2003) 10.1073/pnas.1033107100

[19]

Findlay "Stream microbial ecology" J. North Am. Benthol. Soc. (2010) 10.1899/09-023.1

[20]

Gao "Vertical and horizontal assemblage patterns of bacterial communities in a eutrophic river receiving domestic wastewater in southeast China" Environ. Pollut. (2017) 10.1016/j.envpol.2017.06.081

[21]

Glenn "Multivariate regression trees: a new technique for modeling species-environment relationships" Ecology (2002)

[22]

Hall "The trophic significance of bacteria in a detritus-based stream food web" Ecology (1998) 10.1890/0012-9658(1998)079[1995:ttsobi]2.0.co;2

[23]

Henry "Restoration ecology of riverine wetlands: a 5-year post-operation survey on the Rhône River, France" Ecol. Eng. (2002) 10.1016/s0925-8574(02)00019-8

[24]

EFFECTS OF BIODIVERSITY ON ECOSYSTEM FUNCTIONING: A CONSENSUS OF CURRENT KNOWLEDGE

D. U. Hooper, F. S. CHAPIN, J. J. Ewel et al.

Ecological Monographs 2005 10.1890/04-0922

[25]

Hubbell (2001)

[26]

Langenheder "Species sorting and neutral processes are both important during the initial assembly of bacterial communities" Int. Soc. Microb. Ecol. J. (2011)

[27]

Liu "Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River" Microbiome (2018) 10.1186/s40168-017-0388-x

[28]

Decoupling function and taxonomy in the global ocean microbiome

Stilianos Louca, Laura Wegener Parfrey, Michael Doebeli

Science 2016 10.1126/science.aaf4507

[29]

Madsen "Microorganisms and their roles in fundamental biogeochemical cycles" Curr. Opin. Biotechnol. (2011) 10.1016/j.copbio.2011.01.008

[30]

Marti "Use of pyrosequencing to explore the benthic bacterial community structure in a river impacted by wastewater treatment plant discharges" Res. Microbiol. (2014) 10.1016/j.resmic.2014.04.002

[31]

Pan "Effects of the combination of aeration and biofilm technology on transformation of nitrogen in black-odor river" Water Sci. Technol. (2016) 10.2166/wst.2016.212

[32]

Prosser "Ecosystem processes and interactions in a morass of diversity" FEMS Microbiol. Ecol. (2012) 10.1111/j.1574-6941.2012.01435.x

[33]

Qian "Beta diversity of angiosperms in temperate floras of eastern Asia and eastern North America" Ecol. Lett. (2005) 10.1111/j.1461-0248.2004.00682.x

[34]

Read "Catchment-scale biogeography of riverine bacterioplankton" Int. Soc. Microb. Ecol. J. (2015)

[35]

Detecting Novel Associations in Large Data Sets

David N. Reshef, Yakir A. Reshef, Hilary K. Finucane et al.

Science 2011 10.1126/science.1205438

[36]

Roberto "Sediment bacteria in an urban stream: spatiotemporal patterns in community composition" Water Res. (2018) 10.1016/j.watres.2018.01.045

[37]

A safe operating space for humanity

Johan Rockström, Will Steffen, Kevin Noone et al.

Nature 2009 10.1038/461472a

[38]

Mammals and the nature of continents

G. G. Simpson

American Journal of Science 1943 10.2475/ajs.241.1.1

[39]

Groundwater–surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover

James C. Stegen, James K. Fredrickson, Michael J. Wilkins et al.

Nature Communications 2016 10.1038/ncomms11237

[40]

Stegen "Quantifying community assembly processes and identifying features that impose them" Int. Soc. Microb. Ecol. J. (2013)

[41]

Stegen "Stochastic and deterministic assembly processes in subsurface microbial communities" Int. Soc. Microb. Ecol. J. (2012)

[42]

Tripathi "Soil pH mediates the balance between stochastic and deterministic assembly of bacteria" Int. Soc. Microb. Ecol. J. (2018)

[43]

Human Domination of Earth's Ecosystems

Peter M. Vitousek, Harold A. Mooney, Jane Lubchenco et al.

Science 1997 10.1126/science.277.5325.494

[44]

Wang "Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes" Int. Soc. Microb. Ecol. J. (2013)

[45]

Wang "Study on nitrogen dynamics at the sediment–water interface of dongting lake, China" Aquat. Geochem. (2014) 10.1007/s10498-014-9232-0

[46]

Wang "Shift in bacterioplankton diversity and structure: influence of anthropogenic disturbances along the Yarlung Tsangpo River on the Tibetan Plateau, China" Sci. Rep. (2017) 10.1038/s41598-017-12893-4

[47]

Ward "The serial discontinuity concept : extending the model to floodplain rivers" Regul. Rivers Res. Manag. (1995) 10.1002/rrr.3450100211

[48]

Winter "Longitudinal changes in the bacterial community composition of the Danube River: a whole-river approach" Appl. Environ. Microbiol. (2007) 10.1128/aem.01849-06

[49]

Wright "On the meaning and measurement of nestedness of species assemblages" Oecologia (1992) 10.1007/bf00317469

[50]

Wu "Sediment bacterial communities in a eutrophic lake influenced by multiple inflow-rivers" Environ. Sci. Pollut. Res. (2017) 10.1007/s11356-017-9602-4

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Details

Published: Sep 01, 2019
Vol/Issue: 161
Pages: 98-107
License: View

Authors

Tianjin University of Science and Technology

Shanghai University

School of Finance and Public Administration, Anhui University of Finance & Economics, Bengbu 233030, China

C

Chen Xu

Rosenstiel Basic Medical Sciences Research Center, Brandeis University, MS029, 415 South Street, Waltham, MA 02454;

Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.; Program in Cellular and Molecular Medicine, Boston Children’s Hospital, Boston, MA 02115, USA.

H

Huanjun Zhang

Funding

National Natural Science Foundation of China Award: 51879079

Fundamental Research Funds for the Central Universities

China Postdoctoral Science Foundation Award: 2015M580389

Jiangsu Higher Education Institutions

Cite This Article

Wenlong Zhang, Mengting Lei, Yi Li, et al. (2019). Determination of vertical and horizontal assemblage drivers of bacterial community in a heavily polluted urban river. Water Research, 161, 98-107. https://doi.org/10.1016/j.watres.2019.05.107

Determination of vertical and horizontal assemblage drivers of bacterial community in a heavily polluted urban river

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