The significance of recent diversification in the Northern Hemisphere in shaping the modern global flora revealed from the herbaceous tribe of Rubieae (Rubiaceae)

Li-E Yang; Lu Sun; De-Li Peng; Guang-Jie Chen; Hang Sun; Ze-Long Nie

doi:10.1016/j.ympev.2022.107628

journal article Dec 01, 2022

The significance of recent diversification in the Northern Hemisphere in shaping the modern global flora revealed from the herbaceous tribe of Rubieae (Rubiaceae)

Li-E Yang

Lu Sun

De-Li Peng Guang-Jie Chen Hang Sun

Ze-Long Nie

Molecular Phylogenetics and Evolution Vol. 177 pp. 107628 · Elsevier BV

View at Publisher Save 10.1016/j.ympev.2022.107628

Topics

No keywords indexed for this article. Browse by subject →

References

80

[1]

Abbott "Evolution in the Arctic: a phylogeographic analysis of the circumarctic plant, Saxifraga oppositifolia (Purple saxifrage)" New Phytol. (2004) 10.1046/j.1469-8137.2003.00953.x

[2]

Antonelli "Settling a family feud: a high-level phylogenomic framework for the Gentianales based on 353 nuclear genes and partial plastomes" Am. J. Bot. (2021) 10.1002/ajb2.1697

[3]

Antonelli "Tracing the impact of the Andean uplift on Neotropical plant evolution" P Natl Acad Sci USA (2009) 10.1073/pnas.0811421106

[4]

Axelrod "Evolution and biogeography of Madrean-Tethyan sclerophyll vegetation" Ann. Mo. Bot. Gard. (1975) 10.2307/2395199

[5]

Backlund "Paraphyly of Paederieae, recognition of Putorieae and expansion of Plocama (Rubiaceae-Rubioideae)" Taxon (2007) 10.1002/tax.562006

[6]

A Review of Molecular Phylogenetic Studies of Rubiaceae1

Birgitta Bremer

Annals of the Missouri Botanical Garden 2009 10.3417/2006197

[7]

Bremer "Time tree of Rubiaceae: phylogeny and dating the family, subfamilies, and tribes" Int. J. Plant Sci. (2009) 10.1086/599077

[8]

Bremer "Molecular phylogenetic dating of asterid flowering plants shows early Cretaceous diversification" Syst. Biol. (2004) 10.1080/10635150490445913

[9]

Global vegetation change through the Miocene/Pliocene boundary

Thure E. Cerling, John M. Harris, Bruce J. MacFadden et al.

Nature 1997 10.1038/38229

[10]

Clark "Patterns of diversification and ancestral range reconstruction in the southeast Asian-Pacific angiosperm lineage Cyrtandra (Gesneriaceae)" Mol. Phylogenet. Evol. (2009) 10.1016/j.ympev.2009.09.002

[11]

Davis "A global assessment of distribution, diversity, endemism, and taxonomic effort in theRubiaceae" Ann. Mo. Bot. Gard. (2009) 10.3417/2006205

[12]

Deng "Role of the Qinghai-Tibetan Plateau uplift in the Northern Hemisphere disjunction: evidence from two herbaceous genera of Rubiaceae" Sci. Rep-UK (2017) 10.1038/s41598-017-13543-5

[13]

Drummond "A Rough Guide to beast 1.4. Edgar, R.C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput" Nucleic Acids Res (2007)

[14]

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar

Nucleic Acids Research 2004 10.1093/nar/gkh340

[15]

Ehrendorfer "Paraphyly and polyphyly in the worldwide tribe Rubieae (Rubiaceae): challenges for generic delimitation" Ann. Mo. Bot. Gard.. (2014) 10.3417/2012088

[16]

Ehrendorfer "Phylogeny, character evolution and spatiotemporal diversification of the species-rich and world-wide distributed tribe Rubieae (Rubiaceae)" PLoS ONE (2018) 10.1371/journal.pone.0207615

[17]

Emadzade "Northern Hemisphere origin, transoceanic dispersal, and diversification of Ranunculeae DC. (Ranunculaceae) in the Cenozoic" J. Biogeogr. (2010) 10.1111/j.1365-2699.2010.02404.x

[18]

Favre "The role of the uplift of the Qinghai-Tibetan Plateau for the evolution of Tibetan biotas" Biol. Rev. (2015) 10.1111/brv.12107

[19]

Folk "Rates of niche and phenotype evolution lag behind diversification in a temperate radiation" P. Natl. Acad. Sci. USA (2019) 10.1073/pnas.1817999116

[20]

Friis "Angiosperm fruits and seeds from the Middle Miocene of Jutland (Denmark)" Biologiske Skrifter (1985)

[21]

Gargiulo "Phylogenetic reconstruction of Asperula sect. Cynanchicae (Rubiaceae) reveals a mosaic of evolutionary histories" Taxon (2015) 10.12705/644.7

[22]

Graham "Fossil record of the Rubiaceae" Ann. Mo. Bot. Gard. (2009) 10.3417/2006165

[23]

Guo "Onset of Asian desertification by 22 Myr ago inferred from loess deposits in China" Nature (2002) 10.1038/416159a

[24]

Hughes "The ubiquity of alpine plant radiations: from the Andes to the Hengduan Mountains" New Phytol. (2015) 10.1111/nph.13230

[25]

Huysmans "Pollen morphology of NW European representatives confirms monophyly of Rubieae (Rubiaceae)" Revi. Palaeobot. Palyno. (2003) 10.1016/s0034-6667(03)00121-0

[26]

Jansen "Aluminium accumulation in leaves of Rubiaceae: systematic and phylogenetic implications" Ann. Bot. (2000) 10.1006/anbo.1999.1000

[27]

Jeong "Phylogeny of Galium L. (Rubiaceae) from Korea and Japan based on chloroplast DNA sequence" Bangl. J. Plant Taxon. (2016) 10.3329/bjpt.v23i2.30858

[28]

Kulju "Molecular phylogeny of Macaranga, Mallotus, and related genera (Euphorbiaceae s.s.): insights from plastid and nuclear DNA sequence data" Am. J. Bot. (2007) 10.3732/ajb.94.10.1726

[29]

Legendre "The evolution of mammalian faunas in Europe during the Eocene and Oligocene" (1992)

[30]

Lens "Woodiness within the Spermacoceae-Knoxieae alliance (Rubiaceae): retention of the basal woody condition in rubiaceae or recent innovation?" Ann Bot. (2009) 10.1093/aob/mcp048

[31]

Leslie "Hemisphere-scale differences in conifer evolutionary dynamics" P. Natl. Acad. Sci. USA (2012) 10.1073/pnas.1213621109

[32]

Leopold "Miocene pollen and spore flora of Eniwetok Atoll, Marshall Islands" Geol. Surv. Prof. Pap. (1969)

[33]

Li "More miocene dispersal between Africa and Asia-the case of Bridelia (Phyllanthaceae)" Syst. Bot. (2009) 10.1600/036364409789271263

[34]

Li "Phylogeny and diversification of Chinese Araliaceae based on nuclear and plastid DNA sequence data" J. Syst. Evol. (2016) 10.1111/jse.12196

[35]

Linder "Plant species radiations: where, when, why?" Philos. T. R. Soc. B (2008) 10.1098/rstb.2008.0075

[36]

Marinkovich "Evidence for an early opening of the Bering Strait" Nature (1999) 10.1038/16446

[37]

Meseguer "Integrating fossils, phylogenies, and niche models into biogeography to reveal ancient evolutionary history: the case of Hypericum (Hypericaceae)" Syst. Biol. (2015) 10.1093/sysbio/syu088

[38]

Milne "The origin and evolution of tertiary relict floras" Adv. Bot. Res. (2002) 10.1016/s0065-2296(02)38033-9

[39]

Moore "Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures" P. Natl. Acad. Sci. USA (2016) 10.1073/pnas.1518659113

[40]

Morley "Cretaceous and Tertiary climate change and the past distribution of megathermal rainforests" (2011)

[41]

Natali, A., Manen, J.F., Kiehn, M., Ehrendorfer, F., 1996. Tribal, generic and specific relationships in the Rubioideae-Rubieae (Rubiaceae) based on sequence data of a cpDNA intergene region. In: Robbrecht E., Puff C., Smet E. (Eds.), Proceedings of the Second International Rubiaceae Conference. Natl Botan Garden Belgium, Meise, Belgium. pp. 193–203.

[42]

Nie "Monophyly of Kelloggia Torrey ex Benth. (Rubiaceae) and evolution of its intercontinental disjunction between western North America and eastern Asia" Am. J. Bot. (2005) 10.3732/ajb.92.4.642

[43]

Nie "Post-Boreotropical dispersals explain the pantropical disjunction in Paederia (Rubiaceae)" Ann. Bot. (2013) 10.1093/aob/mct053

[44]

Nie "Recent assembly of the global herbaceous flora: evidence from the paper daisies (Asteraceae: Gnaphalieae)" New Phytol. (2016) 10.1111/nph.13740

[45]

Nylander, J., 2004. MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.

[46]

Palazzesi "Fossil pollen records reveal a late rise of open- habitat ecosystems in Patagonia" Nat. Commun. (2012) 10.1038/ncomms2299

[47]

APE: Analyses of Phylogenetics and Evolution in R language

Emmanuel Paradis, Julien Claude, Korbinian Strimmer

Bioinformatics 2004 10.1093/bioinformatics/btg412

[48]

Potter "Global Miocene tectonics and the modern world" Earth-Sci. Rev. (2009) 10.1016/j.earscirev.2009.07.003

[49]

Pound "A Tortonian (late Miocene, 11.61-7.25 Ma) global vegetation reconstruction" Palaeogeogr. Palaeoclimato. Palaeoecol. (2011) 10.1016/j.palaeo.2010.11.029

[50]

Pound "Global vegetation dynamics and latitudinal temperature gradients during the Mid to Late Miocene (15.97-5.33 Ma)" Earth-Sci. Rev. (2012) 10.1016/j.earscirev.2012.02.005

Showing 50 of 80 references

Metrics

11

Citations

80

References

Details

Published: Dec 01, 2022
Vol/Issue: 177
Pages: 107628
License: View

Authors

Funding

National Natural Science Foundation of China Award: 30970193

Construct Program of the Key Discipline in Hunan Province Award: 2019QZKK0502

Natural Science Foundation of Yunnan Province Award: 202001AU070092

Cite This Article

Li-E Yang, Lu Sun, De-Li Peng, et al. (2022). The significance of recent diversification in the Northern Hemisphere in shaping the modern global flora revealed from the herbaceous tribe of Rubieae (Rubiaceae). Molecular Phylogenetics and Evolution, 177, 107628. https://doi.org/10.1016/j.ympev.2022.107628

The significance of recent diversification in the Northern Hemisphere in shaping the modern global flora revealed from the herbaceous tribe of Rubieae (Rubiaceae)

You May Also Like