Streamlining Bottom-Up Protein Identification Based on Selective Ultraviolet Photodissociation (UVPD) of Chromophore-Tagged Histidine- and Tyrosine-Containing Peptides

Julia R. Aponte; Lisa Vasicek; Jagannath Swaminathan; Hua Xu; Myong Chul Koag; Sun-Mi Lee; Jennifer S. Brodbelt

doi:10.1021/ac403654m

journal article Jun 16, 2014

Streamlining Bottom-Up Protein Identification Based on Selective Ultraviolet Photodissociation (UVPD) of Chromophore-Tagged Histidine- and Tyrosine-Containing Peptides

Julia R. Aponte Lisa Vasicek Jagannath Swaminathan Hua Xu

Myong Chul Koag Sun-Mi Lee

Jennifer S. Brodbelt

Analytical Chemistry Vol. 86 No. 13 pp. 6237-6244 · American Chemical Society (ACS)

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References

60

[1]

Thompson A. J. Amino Acids (2012) 10.1007/s00726-012-1287-x

[2]

Roeser J. Anal. Bioanal. Chem. (2010) 10.1007/s00216-010-3471-8

[3]

Impens F. Proteomics (2010) 10.1002/pmic.200900418

[4]

Matta A. Mass Spectrom. Rev. (2010) 10.1002/mas.20296

[5]

Schirle M. Chem. Biol. (2012) 10.1016/j.chembiol.2012.01.002

[6]

Lund H. Anal. Chem. (2012) 10.1021/ac301418f

[7]

Angel T. E. Chem. Soc. Rev. (2012) 10.1039/c2cs15331a

[8]

Protein Analysis by Shotgun/Bottom-up Proteomics

Yaoyang Zhang, Bryan R. Fonslow, Bing Shan et al.

Chemical Reviews 2013 10.1021/cr3003533

[9]

Veenstra T. D. Electrophoresis (2004) 10.1002/elps.200490007

[10]

Michalski A. J. Proteome Res. (2011) 10.1021/pr101060v

[11]

Hansen T. A. Anal. Chem. (2012) 10.1021/ac3010007

[12]

Mirzaei H. J. Chromatogr. B (2005) 10.1016/j.jchromb.2004.08.028

[13]

Regnier F. E. Proteomics (2006) 10.1002/pmic.200500553

[14]

Gevaert K. Mol. Cell. Proteomics (2002) 10.1074/mcp.m200061-mcp200

[15]

Staes A. Nat. Protoc. (2011) 10.1038/nprot.2011.355

[16]

Staes A. Proteomics (2008) 10.1002/pmic.200700950

[17]

Gevaert K. Nat. Biotechnol. (2003) 10.1038/nbt810

[18]

McDonald L. Nat. Methods (2005) 10.1038/nmeth811

[19]

McDonald L. Nat. Protoc. (2006) 10.1038/nprot.2006.317

[20]

Yamaguchi M. Rapid Commun. Mass Spectrom. (2008) 10.1002/rcm.3735

[21]

Schilling O. Nat. Methods (2010) 10.1038/nmeth.1467

[22]

Kuyama H. Proteomics (2008) 10.1002/pmic.200701044

[23]

Xu G. ACS Chem. Biol. (2011) 10.1021/cb200164h

[24]

Rose C. M. Anal. Chem. (2013) 10.1021/ac400476w

[25]

Tabarin T. Rapid Commun. Mass Spectrom. (2005) 10.1002/rcm.2124

[26]

Zhang L. Anal. Chem. (2009) 10.1021/ac9012557

[27]

Madsen J. A. J. Proteome Res. (2010) 10.1021/pr100515x

[28]

Enjalbert Q. Rapid Commun. Mass Spectrom. (2011) 10.1002/rcm.5232

[29]

Kim T.-Y. Rapid Commun. Mass Spectrom. (2005) 10.1002/rcm.1969

[30]

Madsen J. A. Proteomics (2011) 10.1002/pmic.201000565

[31]

Crowe M. C. J. Am. Soc. Mass Spectrom. (2004) 10.1016/j.jasms.2004.07.016

[32]

Gardner M. W. Anal. Chem. (2009) 10.1021/ac901313m

[33]

Vasicek L. A. J. Am. Soc. Mass Spectrom. (2011) 10.1007/s13361-011-0119-7

[34]

Crowe M. C. Anal. Chem. (2005) 10.1021/ac0509410

[35]

Yeh G. K. J. Am. Soc. Mass Spectrom. (2009) 10.1016/j.jasms.2008.10.019

[36]

Wilson J. J. Anal. Chem. (2007) 10.1021/ac071241t

[37]

Gardner M. W. Anal. Chem. (2009) 10.1021/ac9005233

[38]

Oh J. Y. Rapid Commun. Mass Spectrom. (2005) 10.1002/rcm.1922

[39]

Liu Z. J. Am. Soc. Mass Spectrom. (2009) 10.1016/j.jasms.2008.12.014

[40]

Agarwal A. Anal. Chem. (2011) 10.1021/ac201650v

[41]

Sun Q. Anal. Chem. (2010) 10.1021/ac100256v

[42]

Diedrich J. K. Anal. Chem. (2010) 10.1021/ac902786q

[43]

Enjalbert Q. Anal. Bioanal. Chem. (2013) 10.1007/s00216-012-6603-5

[44]

Ko B. J. J. Am. Soc. Mass Spectrom. (2011) 10.1007/s13361-010-0016-5

[45]

Wilson J. J. Anal. Chem. (2008) 10.1021/ac800315k

[46]

Cotham V. C. Anal. Chem. (2013) 10.1021/ac400851x

[47]

Vasicek L. Mol. Cell. Proteomics (2012) 10.1074/mcp.o111.015826

[48]

Schlick T. L. J. Am. Chem. Soc. (2005) 10.1021/ja046239n

[49]

Interior Surface Modification of Bacteriophage MS2

Jacob M. Hooker, Ernest W. Kovacs, Matthew B. Francis

Journal of the American Chemical Society 2004 10.1021/ja031790q

[50]

Joshi N. S. J. Am. Chem. Soc. (2004) 10.1021/ja0439017

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Published: Jun 16, 2014
Vol/Issue: 86(13)
Pages: 6237-6244

Authors

J

Julia R. Aponte