journal article May 09, 2014

Coupling Between Hydrogen Atoms Transfer and Stacking Interaction in Adenine-Thymine/Guanine-Cytosine Complexes: A Theoretical Study

View at Publisher Save 10.1021/jp502792r
Topics

No keywords indexed for this article. Browse by subject →

References
56
[1]
Fiethen A. J. Am. Chem. Soc. (2008) 10.1021/ja076781m
[2]
Cooper V. R. J. Am. Chem. Soc. (2008) 10.1021/ja0761941
[3]
Shishkin O. V. Int. J. Mol. Sci. (2003) 10.3390/i4100537
[4]
Zoete Z. J. Chem. Phys. (2004) 10.1063/1.1774152
[5]
Matsui T. Chem. Phys. Lett. (2009) 10.1016/j.cplett.2009.07.054
[6]
Matsui T. Int. J. Quantum Chem. (2009) 10.1002/qua.22092
[7]
Villani G. ChemPhysChem (2013) 10.1002/cphc.201200971
[8]
Villani G. Phys. Chem. Chem. Phys. (2013) 10.1039/c3cp52855c
[9]
Florian J. J. Am. Chem. Soc. (1994) 10.1021/ja00083a034
[10]
Florian J. J. Am. Chem. Soc. (1996) 10.1021/ja951983g
[11]
Jurečka P. J. Am. Chem. Soc. (2003) 10.1021/ja036611j
[12]
Shimizu N. J. Mol. Struct. (2005) 10.1016/j.molstruc.2004.11.015
[13]
Kurita N. Chem. Phys. Lett. (2005) 10.1016/j.cplett.2005.01.087
[14]
Villani G. Chem. Phys. (2005) 10.1016/j.chemphys.2005.04.030
[15]
Villani G. Chem. Phys. (2006) 10.1016/j.chemphys.2005.11.006
[16]
Matsui T. Chem. Phys. Lett. (2006) 10.1016/j.cplett.2006.03.054
[17]
Sarmah P. Chem. Phys. Lett. (2011) 10.1016/j.cplett.2011.04.056
[18]
Cerón-Carrasco J. P. Phys. Chem. Chem. Phys. (2012) 10.1039/c2cp40515f
[19]
Chen H. Y. J. Am. Chem. Soc. (2009) 10.1021/ja906899p
[20]
Chen H.-Y. Phys. Chem. Chem. Phys. (2011) 10.1039/c0cp01419b
[21]
Galano A. Phys. Chem. Chem. Phys. (2012) 10.1039/c2cp40799j
[22]
Acosta-Silva C. J. Phys. Chem. B (2010) 10.1021/jp103850h
[23]
Cerón-Carrasco J. P. J. Phys. Chem. A (2009) 10.1021/jp906551f
[24]
A base-centred explanation of the B-to-A transition in DNA

C.R. Calladine, H.R. Drew

Journal of Molecular Biology 1984 10.1016/0022-2836(84)90251-1
[25]
Dickerson R. E. EMBO J. (1989) 10.1002/j.1460-2075.1989.tb03339.x
[26]
Lu X.-J. J. Mol. Biol. (1999) 10.1006/jmbi.1998.2390
[27]
Olson W. K. J. Mol. Biol. (2001) 10.1006/jmbi.2001.4987
[28]
Calladine C. R. (1992)
[29]
Olson W. K. Proc. Natl. Acad. Sci. U. S. A. (1998) 10.1073/pnas.95.19.11163
[30]
Geggier S. Proc. Natl. Acad. Sci. U. S. A. (2010) 10.1073/pnas.1004809107
[31]
Basham B. Proc. Natl. Acad. Sci. U. S. A. (1995) 10.1073/pnas.92.14.6464
[32]
Sequence-dependent thermodynamics of a coarse-grained DNA model

Petr Šulc, Flavio Romano, Thomas E. Ouldridge et al.

The Journal of Chemical Physics 2012 10.1063/1.4754132
[33]
Structure of a B-DNA dodecamer

Richard E. Dickerson, Horace R. Drew

Journal of Molecular Biology 1981 10.1016/0022-2836(81)90357-0
[34]
El Hassan M. A. Philos. Trans. R. Soc., A (1997) 10.1098/rsta.1997.0002
[35]
Gorin A. A. J. Mol. Biol. (1995) 10.1006/jmbi.1994.0120
[36]
Moody E. M. J. Am. Chem. Soc. (2003) 10.1021/ja038897y
[37]
Manalo M. N. J. Am. Chem. Soc. (2007) 10.1021/ja0692940
[38]
Doi K. Philos. Trans. R. Soc., A (2010) 10.1098/rsta.2010.0068
[39]
Doye J. P. K. Phys. Chem. Chem. Phys. (2013) 10.1039/c3cp53545b
[40]
Gil A. J. Phys. Chem. B (2009) 10.1021/jp809737c
[41]
Svozil D. J. Phys. Chem. B (2010) 10.1021/jp910788e
[42]
Šponer J. Nucleic Acids Res. (2000) 10.1093/nar/28.24.4893
[43]
Cerón-Carrasco J. P. Phys. Chem. Chem. Phys. (2011) 10.1039/c1cp20946a
[44]
Gu J. ChemPhysChem (2006) 10.1002/cphc.200600294
[45]
Gu J. J. Chem. Phys. (2007) 10.1063/1.2780148
[46]
Gaussian 09, RevisionA.1,Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Scalmani, G.; Barone, V.; Mennucci, B.; Petersson, G. A.;Gaussian, Inc.,Wallingford CT, 2009.
[48]
Villani G. Chem. Phys. (2006) 10.1016/j.chemphys.2006.01.015
[49]
Villani G. Chem. Phys. (2007) 10.1016/j.chemphys.2007.06.005
[50]
Villani G. J. Chem. Phys. (2008) 10.1063/1.2890040

Showing 50 of 56 references

Metrics
12
Citations
56
References
Details
Published
May 09, 2014
Vol/Issue
118(20)
Pages
5439-5452
Cite This Article
Giovanni Villani (2014). Coupling Between Hydrogen Atoms Transfer and Stacking Interaction in Adenine-Thymine/Guanine-Cytosine Complexes: A Theoretical Study. The Journal of Physical Chemistry B, 118(20), 5439-5452. https://doi.org/10.1021/jp502792r