Tertiary Structure Prediction of C-Peptide of Ribonuclease A by Multicanonical Algorithm

Ulrich H. E. Hansmann; Yuko Okamoto

doi:10.1021/jp9728215

journal article Jan 01, 1998

Tertiary Structure Prediction of C-Peptide of Ribonuclease A by Multicanonical Algorithm

Ulrich H. E. Hansmann Yuko Okamoto

The Journal of Physical Chemistry B Vol. 102 No. 4 pp. 653-656 · American Chemical Society (ACS)

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References

17

[1]

Nature of the charged-group effect on the stability of the C-peptide helix.

K R Shoemaker, P S Kim, D N Brems et al.

Proceedings of the National Academy of Sciences 1985 10.1073/pnas.82.8.2349

[2]

Proton NMR studies of the solution conformations of an analog of the C-peptide of ribonuclease A

John J. Osterhout, Robert L. Baldwin, Eunice J. York et al.

Biochemistry 1989 10.1021/bi00443a042

[3]

Berg B. A. Phys. Lett. (1991)

[4]

Tilton R. F. Biochemistry (1992) 10.1021/bi00124a006

[5]

Kawai H. Chem. Lett. (1991)

[6]

Okamoto Y. Protein Eng. (1991) 10.1093/protein/4.6.639

[7]

Optimization by Simulated Annealing

S. Kirkpatrick, C. D. Gelatt, M. P. Vecchi

Science 1983 10.1126/science.220.4598.671

[8]

Energy parameters in polypeptides. VII. Geometric parameters, partial atomic charges, nonbonded interactions, hydrogen bond interactions, and intrinsic torsional potentials for the naturally occurring amino acids

F. A. Momany, R. F. McGuire, A. W. Burgess et al.

The Journal of Physical Chemistry 1975 10.1021/j100589a006

[9]

Némethy G. J. Phys. Chem. (1983) 10.1021/j100234a011

[10]

Sippl M. J. J. Phys. Chem. (1984) 10.1021/j150669a035

[11]

Okamoto Y. Biopolymers (1994) 10.1002/bip.360340408

[12]

Hansmann U. H. E. J. Comput. Chem. (1997)

[13]

Hansmann U. H. E. J. Comput. Chem. (1993)

[14]

Hansmann U. H. E. Physica (1994)

[15]

Okamoto Y. J. Phys. Chem. (1995) 10.1021/j100028a031

[16]

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

P. J. Kraulis

Journal of Applied Crystallography 1991 10.1107/s0021889891004399

[17]

Sayle R. A. J. TIBS (1995)

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Details

Published: Jan 01, 1998
Vol/Issue: 102(4)
Pages: 653-656

Authors

U

Ulrich H. E. Hansmann

Department of Theoretical Studies, Institute for Molecular Science, Okazaki, Aichi 444-8585, Japan

Y

Yuko Okamoto

Department of Theoretical Studies, Institute for Molecular Science, Okazaki, Aichi 444-8585, Japan

Cite This Article

Ulrich H. E. Hansmann, Yuko Okamoto (1998). Tertiary Structure Prediction of C-Peptide of Ribonuclease A by Multicanonical Algorithm. The Journal of Physical Chemistry B, 102(4), 653-656. https://doi.org/10.1021/jp9728215

Tertiary Structure Prediction of C-Peptide of Ribonuclease A by Multicanonical Algorithm

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