journal article Dec 29, 2009

Trypano-PPI: A Web Server for Prediction of Unique Targets in Trypanosome Proteome by using Electrostatic Parameters of Protein−protein Interactions

View at Publisher Save 10.1021/pr900827b
Topics

No keywords indexed for this article. Browse by subject →

References
88
[1]
Naula C. Biochim. Biophys. Acta (2005) 10.1016/j.bbapap.2005.08.018
[2]
Cribb P. Int. J. Parasitol. (2009) 10.1016/j.ijpara.2008.09.008
[3]
Juri Ayub M. Gene (2005) 10.1016/j.gene.2005.06.006
[4]
Caro F. Biochem. Biophys. Res. Commun. (2005) 10.1016/j.bbrc.2005.06.007
[5]
Choe J. Biochemistry (2003) 10.1021/bi034248n
[6]
Chou K. C. J. Proteome Res. (2006) 10.1021/pr050331g
[7]
Proteomics, networks and connectivity indices

Humberto González‐Díaz, Yenny González‐Díaz, Lourdes Santana et al.

PROTEOMICS 2008 10.1002/pmic.200700638
[8]
Wu J. Genome Inform. Ser. Workshop Genome Inform. (2005)
[9]
Enhanced functional information from predicted protein networks

Jason McDermott, Ram Samudrala

Trends in Biotechnology 2004 10.1016/j.tibtech.2003.11.010
[10]
Huynen M. A. Curr. Opin. Cell Biol. (2003) 10.1016/s0955-0674(03)00009-7
[11]
Lethality and centrality in protein networks

H. Jeong, S. P. Mason, A.-L. Barabási et al.

Nature 2001 10.1038/35075138
[12]
Carmi S. Phys. Rev. E: Stat. Nonlin. Soft Matter Phys. (2006) 10.1103/physreve.73.031909
[13]
Bornholdt S. (2003)
[14]
Estrada E. J. Proteome Res. (2006) 10.1021/pr060106e
[15]
Estrada E. Proteomics (2006) 10.1002/pmic.200500209
[16]
Sharon I. Methods Mol. Biol. (2009) 10.1007/978-1-59745-243-4_4
[17]
Liu L. Biochem. Biophys. Res. Commun. (2009) 10.1016/j.bbrc.2009.01.077
[18]
Skrabanek L. Mol. Biotechnol. (2008) 10.1007/s12033-007-0069-2
[19]
Najafabadi H. S. Genome Biol. (2008) 10.1186/gb-2008-9-5-r87
[20]
Kim S. Nucleic Acids Res. (2008) 10.1093/nar/gkn281
[21]
Jaeger S. BMC Bioinf. (2008) 10.1186/1471-2105-9-s8-s2
[22]
Accurate prediction of protein–protein interactions from sequence alignments using a Bayesian method

Lukas Burger, Erik van Nimwegen

Molecular Systems Biology 2008 10.1038/msb4100203
[23]
Scott M. S. BMC Bioinf. (2007) 10.1186/1471-2105-8-239
[24]
Ivanciuc O. Bioinformatics (2002) 10.1093/bioinformatics/18.10.1358
[25]
Fernández M. J. Mol. Graph Model (2007) 10.1016/j.jmgm.2007.04.011
[26]
Fernández L. Proteins (2007) 10.1002/prot.21349
[27]
Fernández M. Proteins (2008) 10.1002/prot.21524
[28]
Zbilut J. P. J. Proteome Res. (2004) 10.1021/pr049883+
[29]
Krishnan A. J. Proteome Res. (2007) 10.1021/pr070162v
[30]
Krishnan A. Curr. Protein Pept. Sci. (2008) 10.2174/138920308783565705
[31]
Giuliani A. Chem. Rev. (2002) 10.1021/cr0101499
[32]
Marrero-Ponce Y. Bioorg. Med. Chem. (2005) 10.1016/j.bmc.2005.01.062
[33]
Marrero-Ponce Y. Molecules (2004) 10.3390/91201124
[34]
Estrada E. J. Proteome Res. (2006) 10.1021/pr0503174
[35]
Ivanciuc O. Protein Pept. Lett. (2007) 10.2174/092986607782110257
[36]
Ivanciuc O. Curr. Med. Chem. (2004) 10.2174/0929867043455819
[37]
von Grotthuss M. BMC Bioinf. (2006) 10.1186/1471-2105-7-53
[38]
Chua H. N. J Bioinform Comput Biol (2008) 10.1142/s0219720008003497
[39]
Prediction of protein–protein interactions by docking methods

Graham R. Smith, Michael J.E. Sternberg

Current Opinion in Structural Biology 2002 10.1016/s0959-440x(02)00285-3
[40]
Shen H. B. Anal. Biochem. (2008) 10.1016/j.ab.2007.10.012
[41]
Shen H. B. Protein Eng. Des. Sel. (2007) 10.1093/protein/gzm057
[42]
Chou K. C. Biochem. Biophys. Res. Commun. (2007) 10.1016/j.bbrc.2007.06.027
[43]
Chou K. C. Nat. Protoc. (2008) 10.1038/nprot.2007.494
[44]
Chou K. C. J. Proteome Res. (2005) 10.1021/pr050087t
[45]
Chou K. C. J. Proteome Res. (2002) 10.1021/pr025527k
[46]
Chou K. C. J. Proteome Res. (2003) 10.1021/pr0255710
[47]
Chou K. C. J. Proteome Res. (2006) 10.1021/pr060167c
[48]
Chou K. C. J. Proteome Res. (2006) 10.1021/pr060404b
[49]
Santana L. J. Med. Chem. (2006) 10.1021/jm0509849
[50]
González-Díaz H. Bioinformatics (2003) 10.1093/bioinformatics/btg285

Showing 50 of 88 references

Cited By
35
Metrics
35
Citations
88
References
Details
Published
Dec 29, 2009
Vol/Issue
9(2)
Pages
1182-1190
Authors
Cite This Article
Yamilet Rodriguez-Soca, Cristian R. Munteanu, Julián Dorado, et al. (2009). Trypano-PPI: A Web Server for Prediction of Unique Targets in Trypanosome Proteome by using Electrostatic Parameters of Protein−protein Interactions. Journal of Proteome Research, 9(2), 1182-1190. https://doi.org/10.1021/pr900827b
Related

You May Also Like