journal article Dec 19, 2014

Arabidopsis ERF109 mediates cross-talk between jasmonic acid and auxin biosynthesis during lateral root formation

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References
70
[1]
Van Norman, J. M., Xuan, W., Beeckman, T. & Benfey, P. N. To branch or not to branch: the role of pre-patterning in lateral root formation. Development 140, 4301–4310 (2013). 10.1242/dev.090548
[2]
Malamy, J. E. Intrinsic and environmental response pathways that regulate root system architecture. Plant Cell Environ. 28, 67–77 (2005). 10.1111/j.1365-3040.2005.01306.x
[3]
Peret, B. et al. Arabidopsis lateral root development: an emerging story. Trends Plant Sci. 14, 399–408 (2009). 10.1016/j.tplants.2009.05.002
[4]
De Smet, I., Vanneste, S., Inze, D. & Beeckman, T. Lateral root initiation or the birth of a new meristem. Plant Mol. Biol. 60, 871–887 (2006). 10.1007/s11103-005-4547-2
[5]
Lavenus, J. et al. Lateral root development in Arabidopsis: fifty shades of auxin. Trends Plant Sci. 18, 450–458 (2013). 10.1016/j.tplants.2013.04.006
[6]
Fukaki, H. & Tasaka, M. Hormone interactions during lateral root formation. Plant Mol. Biol. 69, 437–449 (2009). 10.1007/s11103-008-9417-2
[7]
Petricka, J. J., Winter, C. M. & Benfey, P. N. Control of Arabidopsis root development. Annu. Rev. Plant Biol. 63, 563–590 (2012). 10.1146/annurev-arplant-042811-105501
[8]
De Smet, I. et al. Analyzing lateral root development: how to move forward. Plant Cell 24, 15–20 (2012). 10.1105/tpc.111.094292
[9]
Marhavy, P. et al. Auxin reflux between the endodermis and pericycle promotes lateral root initiation. EMBO J. 32, 149–158 (2013). 10.1038/emboj.2012.303
[10]
Kelley, D. R. & Estelle, M. Ubiquitin-mediated control of plant hormone signaling. Plant Physiol. 160, 47–55 (2012). 10.1104/pp.112.200527
[11]
Calderon Villalobos, L. I. et al. A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin. Nat. Chem. Biol. 8, 477–485 (2012). 10.1038/nchembio.926
[12]
Okushima, Y., Fukaki, H., Onoda, M., Theologis, A. & Tasaka, M. ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis. Plant Cell 19, 118–130 (2007). 10.1105/tpc.106.047761
[13]
Goh, T., Joi, S., Mimura, T. & Fukaki, H. The establishment of asymmetry in Arabidopsis lateral root founder cells is regulated by LBD16/ASL18 and related LBD/ASL proteins. Development 139, 883–893 (2012). 10.1242/dev.071928
[14]
Zhao, Y. et al. A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science 291, 306–309 (2001). 10.1126/science.291.5502.306
[15]
Wolters, H. & Jurgens, G. Survival of the flexible: hormonal growth control and adaptation in plant development. Nat. Rev. Genet. 10, 305–317 (2009). 10.1038/nrg2558
[16]
Hoffmann, M., Hentrich, M. & Pollmann, S. Auxin-oxylipin crosstalk: relationship of antagonists. J. Integr. Plant Biol. 53, 429–445 (2011). 10.1111/j.1744-7909.2011.01053.x
[17]
Benkova, E. & Hejatko, J. Hormone interactions at the root apical meristem. Plant Mol. Biol. 69, 383–396 (2009). 10.1007/s11103-008-9393-6
[18]
Turner, J. G., Ellis, C. & Devoto, A. The jasmonate signal pathway. Plant Cell 14, (Suppl): S153–S164 (2002). 10.1105/tpc.000679
[19]
Wasternack, C. Jasmonates: an update on biosynthesis, signal transduction and action in plant stress response, growth and development. Ann. Bot. 100, 681–697 (2007). 10.1093/aob/mcm079
[20]
Ueda, J. & Kato, J. Isolation and Identification of a Senescence-promoting Substance from Wormwood (Artemisia absinthium L.). Plant Physiol. 66, 246–249 (1980). 10.1104/pp.66.2.246
[21]
Kazan, K. & Manners, J. M. Jasmonate signaling: toward an integrated view. Plant Physiol. 146, 1459–1468 (2008). 10.1104/pp.107.115717
[22]
Tiryaki, I. & Staswick, P. E. An Arabidopsis mutant defective in jasmonate response is allelic to the auxin-signaling mutant axr1. Plant Physiol. 130, 887–894 (2002). 10.1104/pp.005272
[23]
Ren, C. et al. Point mutations in Arabidopsis Cullin1 reveal its essential role in jasmonate response. Plant J. 42, 514–524 (2005). 10.1111/j.1365-313x.2005.02394.x
[24]
Pauwels, L. et al. NINJA connects the co-repressor TOPLESS to jasmonate signalling. Nature 464, 788–791 (2010). 10.1038/nature08854
[25]
Nagpal, P. et al. Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation. Development 132, 4107–4118 (2005). 10.1242/dev.01955
[26]
Hentrich, M. et al. The jasmonic acid signaling pathway is linked to auxin homeostasis through the modulation of YUCCA8 and YUCCA9 gene expression. Plant J. 74, 626–637 (2013). 10.1111/tpj.12152
[27]
Gutierrez, L. et al. Auxin controls Arabidopsis adventitious root initiation by regulating jasmonic acid homeostasis. Plant Cell 24, 2515–2527 (2012). 10.1105/tpc.112.099119
[28]
Sun, J. et al. Arabidopsis ASA1 is important for jasmonate-mediated regulation of auxin biosynthesis and transport during lateral root formation. Plant Cell 21, 1495–1511 (2009). 10.1105/tpc.108.064303
[29]
Cheng, Y., Dai, X. & Zhao, Y. Auxin biosynthesis by the YUCCA flavin monooxygenases controls the formation of floral organs and vascular tissues in Arabidopsis. Genes Dev. 20, 1790–1799 (2006). 10.1101/gad.1415106
[30]
Sun, J. et al. Jasmonate modulates endocytosis and plasma membrane accumulation of the Arabidopsis PIN2 protein. New Phytol. 191, 360–375 (2011). 10.1111/j.1469-8137.2011.03713.x
[31]
Yu, H. et al. Activated Expression of an Arabidopsis HD-START Protein Confers Drought Tolerance with Improved Root System and Reduced Stomatal Density. Plant Cell 20, 1134–1151 (2008). 10.1105/tpc.108.058263
[32]
Ohme-Takagi, M. & Shinshi, H. Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element. Plant Cell 7, 173–182 (1995). 10.1105/tpc.7.2.173
[33]
Hao, D., Ohme-Takagi, M. & Sarai, A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273, 26857–26861 (1998). 10.1074/jbc.273.41.26857
[34]
Riechmann, J. L. & Meyerowitz, E. M. The AP2/EREBP family of plant transcription factors. Biol. Chem. 379, 633–646 (1998). 10.1515/bchm.1998.379.6.633
[35]
Wang, Z. et al. Identification and characterization of COI1-dependent transcription factor genes involved in JA-mediated response to wounding in Arabidopsis plants. Plant Cell Rep. 27, 125–135 (2008). 10.1007/s00299-007-0410-z
[36]
Khandelwal, A., Elvitigala, T., Ghosh, B. & Quatrano, R. S. Arabidopsis transcriptome reveals control circuits regulating redox homeostasis and the role of an AP2 transcription factor. Plant Physiol. 148, 2050–2058 (2008). 10.1104/pp.108.128488
[37]
Xie, D. X., Feys, B. F., James, S., Nieto-Rostro, M. & Turner, J. G. COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility. Science 280, 1091–1094 (1998). 10.1126/science.280.5366.1091
[38]
Xu, L. et al. The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell 14, 1919–1935 (2002). 10.1105/tpc.003368
[39]
Yan, J. et al. The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor. Plant Cell 21, 2220–2236 (2009). 10.1105/tpc.109.065730
[40]
Yu, L. et al. Arabidopsis Enhanced Drought Tolerance1/HOMEODOMAIN GLABROUS11 Confers Drought Tolerance in Transgenic Rice without Yield Penalty. Plant Physiol. 162, 1378–1391 (2013). 10.1104/pp.113.217596
[41]
McGrath, K. C. et al. Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression. Plant Physiol. 139, 949–959 (2005). 10.1104/pp.105.068544
[42]
Qu, L. J. & Zhu, Y. X. Transcription factor families in Arabidopsis: major progress and outstanding issues for future research. Curr. Opin. Plant Biol. 9, 544–549 (2006). 10.1016/j.pbi.2006.07.005
[43]
Niu, Y., Figueroa, P. & Browse, J. Characterization of JAZ-interacting bHLH transcription factors that regulate jasmonate responses in Arabidopsis. J. Exp. Bot. 62, 2143–2154 (2011). 10.1093/jxb/erq408
[44]
Santino, A. et al. Jasmonate signaling in plant development and defense response to multiple (a)biotic stresses. Plant Cell Rep. 32, 1085–1098 (2013). 10.1007/s00299-013-1441-2
[45]
Fonseca, S., Chico, J. M. & Solano, R. The jasmonate pathway: the ligand, the receptor and the core signalling module. Curr. Opin. Plant Biol. 12, 539–547 (2009). 10.1016/j.pbi.2009.07.013
[46]
Xu, X., Chen, C., Fan, B. & Chen, Z. Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factors. Plant Cell 18, 1310–1326 (2006). 10.1105/tpc.105.037523
[47]
Mandaokar, A. & Browse, J. MYB108 acts together with MYB24 to regulate jasmonate-mediated stamen maturation in Arabidopsis. Plant Physiol. 149, 851–862 (2009). 10.1104/pp.108.132597
[48]
Nakano, T., Suzuki, K., Fujimura, T. & Shinshi, H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 140, 411–432 (2006). 10.1104/pp.105.073783
[49]
Zhao, Y. Auxin biosynthesis and its role in plant development. Annu. Rev. Plant Biol. 61, 49–64 (2010). 10.1146/annurev-arplant-042809-112308
[50]
Bender, J. & Fink, G. R. A Myb homologue, ATR1, activates tryptophan gene expression in Arabidopsis. Proc. Natl Acad. Sci. U S A 95, 5655–5660 (1998). 10.1073/pnas.95.10.5655

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Frontiers in Plant Science
Biochimica et Biophysica Acta (BBA)...
International Journal of Molecular...
Nature Plants
Journal of Experimental Botany
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Dec 19, 2014
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Xiao-Teng Cai, Ping Xu, Ping-Xia Zhao, et al. (2014). Arabidopsis ERF109 mediates cross-talk between jasmonic acid and auxin biosynthesis during lateral root formation. Nature Communications, 5(1). https://doi.org/10.1038/ncomms6833
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