Comparative genomic analysis provides insights into taxonomy and temperature adaption of Aeromonas salmonicida

Meng Long; Huimin Fan; Zhen Gan; Zenghai Jiang; Shaoshuai Tang; Hongli Xia; Yishan Lu

doi:10.1111/jfd.13767

journal article Mar 02, 2023

Comparative genomic analysis provides insights into taxonomy and temperature adaption of Aeromonas salmonicida

Meng Long

Huimin Fan Zhen Gan Zenghai Jiang Shaoshuai Tang Hongli Xia Yishan Lu

Journal of Fish Diseases Vol. 46 No. 5 pp. 545-561 · Wiley

View at Publisher Save 10.1111/jfd.13767

Abstract

AbstractAeromonas salmonicida has long been known as psychrophiles since it is mainly isolated from cold water fish, and recent reports have revealed the existence of mesophilic strains isolated from warm sources. However, the genetic differences between mesophilic and psychrophilic strains remain unclear due to few complete genomes of mesophilic strain are available. In this study, six A. salmonicida (2 mesophilic and 4 psychrophilic) were genome‐sequenced, and comparative analyses of 25 A. salmonicida complete genomes were conducted. The ANI values and phylogenetic analysis revealed that 25 strains formed three independent clades, which were referred as typical psychrophilic, atypical psychrophilic and mesophilic groups. Comparative genomic analysis showed that two chromosomal gene clusters, related to lateral flagella and outer membrane proteins (A‐layer and T2SS proteins), and insertion sequences (ISAs4, ISAs7 and ISAs29) were unique to the psychrophilic groups, while the complete MSH type IV pili were unique to the mesophilic group, all of which may be considered as lifestyle‐related factors. The results of this study not only provide new insights into the classification, lifestyle adaption and pathogenic mechanism of different strains of A. salmonicida, but also contributes to the prevention and control of disease caused by psychrophilic and mesophilic A. salmonicida.

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Details

Published: Mar 02, 2023
Vol/Issue: 46(5)
Pages: 545-561
License: View

Authors

M

Meng Long

Guangdong Provincial Engineering Research Center for Aquatic Animal Health Assessment, and Shenzhen Public Service Platform for Evaluation of Marine Economic Animal Seedings Shenzhen Institute of Guangdong Ocean University Shenzhen China

H

Huimin Fan

Guangdong Provincial Engineering Research Center for Aquatic Animal Health Assessment, and Shenzhen Public Service Platform for Evaluation of Marine Economic Animal Seedings Shenzhen Institute of Guangdong Ocean University Shenzhen China

Z

Zhen Gan

Guangdong Provincial Engineering Research Center for Aquatic Animal Health Assessment, and Shenzhen Public Service Platform for Evaluation of Marine Economic Animal Seedings Shenzhen Institute of Guangdong Ocean University Shenzhen China; Guangdong Provincial Key Laboratory of Aquatic Animal Disease Control and Healthy Culture, and Key Laboratory of Control for Disease of Aquatic Animals of Guangdong Higher Education Institute, College of Fishery Guangdong Ocean University Zhanjiang China

Z

Zenghai Jiang

College of Veterinary Medicine Henan University of Animal Husbandry and Economy Zhengzhou China

S

Shaoshuai Tang

Guangdong Provincial Engineering Research Center for Aquatic Animal Health Assessment, and Shenzhen Public Service Platform for Evaluation of Marine Economic Animal Seedings Shenzhen Institute of Guangdong Ocean University Shenzhen China

H

Hongli Xia

Guangdong Provincial Engineering Research Center for Aquatic Animal Health Assessment, and Shenzhen Public Service Platform for Evaluation of Marine Economic Animal Seedings Shenzhen Institute of Guangdong Ocean University Shenzhen China

Y

Yishan Lu

Guangdong Provincial Engineering Research Center for Aquatic Animal Health Assessment, and Shenzhen Public Service Platform for Evaluation of Marine Economic Animal Seedings Shenzhen Institute of Guangdong Ocean University Shenzhen China; Guangdong Provincial Key Laboratory of Aquatic Animal Disease Control and Healthy Culture, and Key Laboratory of Control for Disease of Aquatic Animals of Guangdong Higher Education Institute, College of Fishery Guangdong Ocean University Zhanjiang China

Cite This Article

Meng Long, Huimin Fan, Zhen Gan, et al. (2023). Comparative genomic analysis provides insights into taxonomy and temperature adaption of Aeromonas salmonicida. Journal of Fish Diseases, 46(5), 545-561. https://doi.org/10.1111/jfd.13767

Comparative genomic analysis provides insights into taxonomy and temperature adaption of Aeromonas salmonicida

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