journal article Open Access Sep 08, 2023

Silver and Hematite Nanoparticles Had a Limited Effect on the Bacterial Community Structure in Soil Cultivated with Phaseolus vulgaris L.

Agronomy Vol. 13 No. 9 pp. 2341 · MDPI AG
View at Publisher Save 10.3390/agronomy13092341
Abstract
The amount of nanoparticles that enters the environment has increased substantially in the last years. How they might affect plant characteristics and the bacterial community structure when they enter the soil, however, is still debated, as there is a continuous interaction between them. In this study, we determined the effect of silver (Ag-NPs) and hematite (α-Fe2O3-NPs) nanoparticles (0.15 g kg−1) on the characteristics of common bean (Phaseolus vulgaris L.) and the rhizosphere, non-rhizosphere and uncultivated soil bacterial community. The application of Ag-NPs or α-Fe2O3-NPs did not affect plant growth, but changed the amount of some heavy metals in the roots and aerial parts. The application of nanoparticles had a limited effect on the diversity, structure and functional profile of the soil and rhizosphere bacterial communities, but they were altered by cultivation of the bean plants and changed over time. It was found that application of Ag-NPs or α-Fe2O3-NPs had no effect on bean plant growth and only a small effect on the bacterial community structure and its putative metabolic functions. These findings show that in a complex system, such as a soil, different factors might affect the bacterial community structure and alter the possible effect of nanoparticles on it.
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References
83
[1]
Dimkpa "Can nanotechnology deliver the promised benefits without negatively impacting soil microbial life?" J. Basic Microbiol. (2014) 10.1002/jobm.201400298
[2]
Nanoparticles: Properties, applications and toxicities

Ibrahim Khan, Khalid Saeed, Idrees Khan

Arabian Journal of Chemistry 2019 10.1016/j.arabjc.2017.05.011
[3]
Ahmed "Destruction of cell topography, morphology, membrane, inhibition of respiration, biofilm formation, and bioactive molecule production by nanoparticles of Ag, ZnO, CuO, TiO2, and Al2O3 toward beneficial soil bacteria" ACS Omega (2020) 10.1021/acsomega.9b04084
[4]
Simonin "Impact of engineered nanoparticles on the activity, abundance, and diversity of soil microbial communities: A review" Environ. Sci. Pollut. Res. (2015) 10.1007/s11356-015-4171-x
[5]
Beddow "Effects of engineered silver nanoparticles on the growth and activity of ecologically important microbes" Environ. Microbiol. Rep. (2014) 10.1111/1758-2229.12147
[6]
Chavan, S., and Nadanathangam, V. (2019). Effects of nanoparticles on plant growth-promoting bacteria in Indian agricultural soil. Agronomy, 9. 10.3390/agronomy9030140
[7]
He "The impact of iron oxide magnetic nanoparticles on the soil bacterial community" J. Soils Sediments (2011) 10.1007/s11368-011-0415-7
[8]
Rui "Iron oxide nanoparticles as a potential iron fertilizer for peanut (Arachis hypogaea)" Front. Plant Sci. (2016) 10.3389/fpls.2016.00815
[9]
Rajput "Accumulation of nanoparticles in the soil-plant systems and their effects on human health" Ann. Agric. Sci. (2020) 10.1016/j.aoas.2020.08.001
[10]
Ameen "A review on metal-based nanoparticles and their toxicity to beneficial soil bacteria and fungi" Ecotoxicol. Environ. Saf. (2021) 10.1016/j.ecoenv.2021.112027
[11]
Wang "Effects of silver nanoparticles on soil microbial communities and bacterial nitrification in suburban vegetable soils" Pedosphere (2017) 10.1016/s1002-0160(17)60344-8
[12]
Sillen "Effects of silver nanoparticles on soil microorganisms and maize biomass are linked in the rhizosphere" Soil Biol. Biochem. (2015) 10.1016/j.soilbio.2015.08.019
[13]
Heidari "Effect of chemical synthesis silver nanoparticles on germination indices and seedlings growth in seven varieties of Lycopersicon esculentum Mill (tomato) plants" J. Clust. Sci. (2016) 10.1007/s10876-015-0932-4
[14]
Zhang "Size-dependent cytotoxicity of silver nanoparticles to Azotobacter vinelandii: Growth inhibition, cell injury, oxidative stress and internalization" PLoS ONE (2018) 10.1371/journal.pone.0209020
[15]
He "Different responses of soil microbial metabolic activity to silver and iron oxide nanoparticles" Chemosphere (2016) 10.1016/j.chemosphere.2015.12.055
[16]
Mahmud "Rhizosphere microbiome manipulation for sustainable crop production" Curr. Plant Biol. (2021) 10.1016/j.cpb.2021.100210
[17]
Priya "Genomics as a potential tool to unravel the rhizosphere microbiome interactions on plant health" J. Microbiol. Methods (2021) 10.1016/j.mimet.2021.106215
[18]
Sparks, D.L. (1996). Methods of Soil Analysis: Chemical Methods, American Society of Agronomy. 10.2136/sssabookser5.3
[19]
Rhoades "Estimating soil salinity from saturate soilpaste electrical conductivity" Soil Sci. Soc. Am. J. (1989) 10.2136/sssaj1989.03615995005300020019x
[20]
Klute "Particle size analysis" Methods of Soil Analysis: Physical and Mineralogical Methods (1986)
[21]
Sparks, D.L. (1996). Methods of Soil Analysis: Chemical Methods Part 3, Soil Science Society of America Inc., American Society of Agronomy.
[22]
Hurlbert "Pseudoreplication and the design of ecological field experiments" Ecol. Monogr. (1984) 10.2307/1942661
[23]
Hoffman "A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli" Gene (1987) 10.1016/0378-1119(87)90131-4
[24]
Sambrook, J., and Rusell, D.W. (2001). Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press. [3rd ed.].
[25]
Dendooven "Phylogenetic analysis of the archaeal community in an alkaline-saline soil of the former lake Texcoco (Mexico)" Extremophiles (2008) 10.1007/s00792-007-0121-y
[26]
Crossa "Phylogenetic and multivariate analyses to determine the effects of different tillage and residue management practices on soil bacterial communities" Appl. Environ. Microbiol. (2010) 10.1128/aem.02726-09
[27]
Bolyen "Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2" Nat. Biotechnol. (2019) 10.1038/s41587-019-0209-9
[28]
DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J Callahan, Paul J McMurdie, Michael J Rosen et al.

Nature Methods 2016 10.1038/nmeth.3869
[29]
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast, Elmar Pruesse, Pelin Yilmaz et al.

Nucleic Acids Research 2012 10.1093/nar/gks1219
[30]
R Core Team (2021). R: A Language and Environment for Statistical Computing, R Core Team.
[31]
Chao "Unifying species diversity, phylogenetic diversity, functional diversity, and related similarity and differentiation measures through hill numbers" Annu. Rev. Ecol. Evol. Syst. (2014) 10.1146/annurev-ecolsys-120213-091540
[32]
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

PAUL J. McMURDIE, Susan Holmes

PLoS ONE 10.1371/journal.pone.0061217
[33]
Fernandes "Unifying the analysis of high-throughput sequencing datasets: Characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis" Microbiome (2014) 10.1186/2049-2618-2-15
[34]
Husson, F., Josse, J., Le, S., and Mazet, J. (2022, January 15). Multivariate Exploratory Analysis and Data Mining. Package: FactoMineR. Available online: https://CRAN.R-project.org/package=FactoMineR.
[35]
Oksanen, J., Blanchet, F.G., Kindt, R., Legendre, P., Minchin, P.R., O’hara, R.B., Friendly, M., McGlinn, D., Simpson, G.L., and Solymos, P. (2022, January 15). Vegan: Community Ecology Package. R Package Version 2.5-7. Available online: https://CRAN.R-project.org/package=vegan.
[36]
Anderson "Distance-based tests for homogeneity of multivariate dispersions" Biometrics (2006) 10.1111/j.1541-0420.2005.00440.x
[37]
Kim "Statistical notes for clinical researchers: Effect size" Restor. Dent. Endod. (2015) 10.5395/rde.2015.40.4.328
[38]
Microbiome Datasets Are Compositional: And This Is Not Optional

Gregory B. Gloor, Jean M. Macklaim, Vera Pawlowsky-Glahn et al.

Frontiers in Microbiology 2017 10.3389/fmicb.2017.02224
[39]
Prerna "Influence of nanoscale micro-nutrient α-Fe2O3 on seed germination, seedling growth, translocation, physiological effects and yield of rice (Oryza sativa) and maize (Zea mays)" Plant Physiol. Biochem. (2021) 10.1016/j.plaphy.2021.03.023
[40]
Haydar "Application of iron oxide nanoparticles as micronutrient fertilizer in mulberry propagation" J. Plant Growth Regul. (2022) 10.1007/s00344-021-10413-3
[41]
Law "The potential of Fe-based magnetic nanomaterials for the agriculture sector" ChemistrySelect (2022) 10.1002/slct.202104603
[42]
Boutchuen "Increased plant growth with hematite nanoparticle fertilizer drop and determining nanoparticle uptake in plants using multimodal approach" J. Nanomater. (2019) 10.1155/2019/6890572
[43]
Sutariya "A microcosm study on effect of iron nanoparticles on Paddy (Oryza sativa) growth" J. Inorg. Organomet. Polym. Mater. (2021) 10.1007/s10904-020-01866-2
[44]
Armendariz "Effects of silver nanoparticles on radish sprouts: Root growth reduction and modifications in the nutritional value" Front. Plant Sci. (2016)
[45]
Li "Uptake, translocation and physiological effects of magnetic iron oxide (γ-Fe2O3) nanoparticles in corn (Zea mays L.)" Chemosphere (2016) 10.1016/j.chemosphere.2016.05.083
[46]
Root water transport of Helianthus annuus L. under iron oxide nanoparticle exposure

Domingo Martínez-Fernández, Didac Barroso, Michael Komárek

Environmental Science and Pollution Research 2016 10.1007/s11356-015-5423-5
[47]
Lei "Environmental transformations and ecological effects of iron-based nanoparticles" Environ. Pollut. (2018) 10.1016/j.envpol.2017.09.052
[48]
Arif "Influence of high and low levels of plant-beneficial heavy metal ions on plant growth and development" Front. Environ. Sci. (2016) 10.3389/fenvs.2016.00069
[49]
Masunaga "Impact of Fe3O4 nanoparticle on nutrient accumulation in common bean plants grown in soil" SN Appl. Sci. (2019) 10.1007/s42452-019-0321-y
[50]
Yang "Effects of iron oxide nanoparticles on the mineral composition and growth of soybean (Glycine max L.) plants" Acta Physiol. Plant (2020) 10.1007/s11738-020-03104-1

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Published
Sep 08, 2023
Vol/Issue
13(9)
Pages
2341
License
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Funding
“Centro de Investigación y de Estudios Avanzados del IPN” (CINVESTAV) Award: COAH-2010-C14-149610
Fondos Mixtos Conacyt-Gobierno del Estado de Coahuila Award: COAH-2010-C14-149610
Cite This Article
Karla E. Zarco-González, Jessica D. Valle-García, Yendi E. Navarro-Noya, et al. (2023). Silver and Hematite Nanoparticles Had a Limited Effect on the Bacterial Community Structure in Soil Cultivated with Phaseolus vulgaris L.. Agronomy, 13(9), 2341. https://doi.org/10.3390/agronomy13092341
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