journal article Open Access Jan 01, 2024

Exploiting root exudates to manage soil-borne disease complexes in a changing climate

Trends in Microbiology Vol. 32 No. 1 pp. 27-37 · Elsevier BV
View at Publisher Save 10.1016/j.tim.2023.07.011
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References
89
[1]
Hartmann "Lorenz Hiltner, a pioneer in rhizosphere microbial ecology and soil bacteriology research" Plant Soil (2008) 10.1007/s11104-007-9514-z
[2]
Plant growth-promoting rhizobacteria and root system functioning

Jordan Vacheron, Guilhem Desbrosses, Marie-Lara Bouffaud et al.

Frontiers in Plant Science 2013 10.3389/fpls.2013.00356
[3]
Rovira "Interactions between plant roots and soil microorganisms" Annu. Rev. Microbiol. (1965) 10.1146/annurev.mi.19.100165.001325
[4]
Rovira "Plant root exudates" Bot. Rev. (1969) 10.1007/bf02859887
[5]
Badri "Regulation and function of root exudates" Plant Cell Environ. (2009) 10.1111/j.1365-3040.2009.01926.x
[6]
Dennis "Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?" FEMS Microbiol. Ecol. (2010) 10.1111/j.1574-6941.2010.00860.x
[7]
Jones "Carbon flow in the rhizosphere: carbon trading at the soil–root interface" Plant Soil (2009) 10.1007/s11104-009-9925-0
[8]
Plant host habitat and root exudates shape soil bacterial community structure

Feth el Zahar Haichar, Christine Marol, Odile Berge et al.

The ISME Journal 2008 10.1038/ismej.2008.80
[9]
Walker "Root exudation and rhizosphere biology" Plant Physiol. (2003) 10.1104/pp.102.019661
[10]
Gransee "Qualitative and quantitative analysis of water-soluble root exudates in relation to plant species and development" J. Plant Nutr. Soil Sci. (2000) 10.1002/1522-2624(200008)163:4<381::aid-jpln381>3.0.co;2-7
[11]
Carvalhais "Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency" J. Plant Nutr. Soil Sci. (2011) 10.1002/jpln.201000085
[12]
The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

Jos M. Raaijmakers, Timothy C. Paulitz, Christian Steinberg et al.

Plant and Soil 2009 10.1007/s11104-008-9568-6
[13]
Hugoni "Plant host habitat and root exudates shape fungal diversity" Mycorrhiza (2018) 10.1007/s00572-018-0857-5
[14]
Liu "Validation of the chemotaxis of plant parasitic nematodes toward host root exudates" J. Nematol. (2019) 10.21307/jofnem-2019-063
[15]
Kawasaki "Manipulating exudate composition from root apices shapes the microbiome throughout the root system" Plant Physiol. (2021) 10.1093/plphys/kiab337
[16]
Seitz "Variation in root exudate composition influences soil microbiome membership and function" Appl. Environ. Microbiol. (2022) 10.1128/aem.00226-22
[17]
Baetz "Root exudates: the hidden part of plant defense" Trends Plant Sci. (2014) 10.1016/j.tplants.2013.11.006
[18]
Howieson "Acid-tolerant species of Medicago produce root exudates at low pH which induce the expression of nodulation genes in Rhizobium meliloti" Funct. Plant Biol. (1992) 10.1071/pp9920287
[19]
Broeckling "Root exudates regulate soil fungal community composition and diversity" Appl. Environ. Microbiol. (2008) 10.1128/aem.02188-07
[20]
Contreras-Cornejo "Trichoderma spp. improve growth of arabidopsis seedlings under salt stress through enhanced root development, osmolite production, and Na+ elimination through root exudates" Mol. Plant-Microbe Interact. (2014) 10.1094/mpmi-09-13-0265-r
[21]
Zhang "Effects of different plant root exudates and their organic acid components on chemotaxis, biofilm formation and colonization by beneficial rhizosphere-associated bacterial strains" Plant Soil (2014) 10.1007/s11104-013-1915-6
[22]
Clocchiatti "The hidden potential of saprotrophic fungi in arable soil: Patterns of short-term stimulation by organic amendments" Appl. Soil Ecol. (2020) 10.1016/j.apsoil.2019.103434
[23]
Feng "Chemotaxis of beneficial rhizobacteria to root exudates: The first step towards root–microbe rhizosphere interactions" Int. J. Mol. Sci. (2021) 10.3390/ijms22136655
[24]
Moghaddam "Enhanced auxin production by Azospirillum pure cultures from plant root exudates" J. Agr. Sci. Tech. (2012)
[25]
Karnwal "Production of indole acetic acid by fluorescent pseudomonas in the presence of l-tryptophan and rice root exudates" J. Plant Pathol. (2009)
[26]
Panichikkal "Root exudate components induced production of plant beneficial metabolites in rhizospheric Pseudomonas spp" Rhizosphere (2021) 10.1016/j.rhisph.2021.100366
[27]
Fan "Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates" BMC Microbiol. (2012) 10.1186/1471-2180-12-116
[28]
Mwita "Gene expression regulation in the plant growth promoting Bacillus atrophaeus UCMB-5137 stimulated by maize root exudates" Gene (2016) 10.1016/j.gene.2016.05.045
[29]
Yi "Plant–microbe interaction: transcriptional response of Bacillus mycoides to potato root exudates" JoVE (2018)
[30]
Xu "Mycorrhizal fungi alter root exudation to cultivate a beneficial microbiome for plant growth" Funct. Ecol. (2023) 10.1111/1365-2435.14249
[31]
Tian "The role of rhizodeposits in shaping rhizomicrobiome" Environ. Microbiol. Rep. (2020) 10.1111/1758-2229.12816
[32]
Yuan "Effect of phenolic acids from banana root exudates on root colonization and pathogen suppressive properties of Bacillus amyloliquefaciens NJN-6" Biol. Control (2018) 10.1016/j.biocontrol.2018.05.016
[33]
Bi "Isoflavone phytoalexins in root exudates participate in mediating the resistance of common bean Phaseolus vulgaris to Phytophthora sojae" Plant Pathol. (2023) 10.1111/ppa.13651
[34]
Were "Phenolics mediate suppression of Fusarium oxysporum f. sp. cubense TR4 by legume root exudates" Rhizosphere (2022) 10.1016/j.rhisph.2021.100459
[35]
Xie "Maize root exudates recruit Bacillus amyloliquefaciens OR2-30 to inhibit Fusarium graminearum infection" Phytopathology (2022) 10.1094/phyto-01-22-0028-r
[36]
Deng "Autotoxic ginsenoside stress induces changes in root exudates to recruit the beneficial burkholderia strain B36 as revealed by transcriptomic and metabolomic approaches" J. Agric. Food Chem. (2023) 10.1021/acs.jafc.3c00311
[37]
Chen "Root exudates of potato onion are involved in the suppression of clubroot in a Chinese cabbage-potato onion-Chinese cabbage crop rotation" Eur. J. Plant Pathol. (2018) 10.1007/s10658-017-1307-5
[38]
Fang "Tobacco rotated with rapeseed for soil-borne phytophthora pathogen biocontrol: mediated by rapeseed root exudates" Front. Microbiol. (2016) 10.3389/fmicb.2016.00894
[39]
De Palma "Plant roots release small extracellular vesicles with antifungal activity" Plants (2020) 10.3390/plants9121777
[40]
Macías-Rodríguez "Trichoderma atroviride promotes tomato development and alters the root exudation of carbohydrates, which stimulates fungal growth and the biocontrol of the phytopathogen Phytophthora cinnamomi in a tripartite interaction system" FEMS Microbiol. Ecol. (2018)
[41]
Wu "Competitive use of root exudates by Bacillus amyloliquefaciens with Ralstonia solanacearum decreases the pathogenic population density and effectively controls tomato bacterial wilt" Sci. Hortic. (2017) 10.1016/j.scienta.2017.01.047
[42]
Lombardi "Root exudates of stressed plants stimulate and attract Trichoderma soil fungi" Mol. Plant-Microbe Interact. (2018) 10.1094/mpmi-12-17-0310-r
[43]
Zhang "Phenolic acids released in maize rhizosphere during maize-soybean intercropping inhibit phytophthora blight of soybean" Front. Plant Sci. (2020) 10.3389/fpls.2020.00886
[44]
Balendres "Metabolomes of potato root exudates: Compounds that stimulate resting spore germination of the soil-borne pathogen Spongospora subterranea" J. Agric. Food Chem. (2016) 10.1021/acs.jafc.6b03904
[45]
Lv "Intercropping with wheat suppressed Fusarium wilt in faba bean and modulated the composition of root exudates" Plant Soil (2020) 10.1007/s11104-019-04413-2
[46]
Gao "Root interactions in a maize/soybean intercropping system control soybean soil-borne disease, red crown rot" PLoS One (2014)
[47]
Lockwood "Evolution of concepts associated with soilborne plant pathogens" Annu. Rev. Phytopathol. (1988) 10.1146/annurev.py.26.090188.000521
[48]
Gautier "Hatching of Globodera pallida induced by root exudates is not influenced by soil microbiota composition" Front. Microbiol. (2020) 10.3389/fmicb.2020.536932
[49]
Turrà "Fungal pathogen uses sex pheromone receptor for chemotropic sensing of host plant signals" Nature (2015) 10.1038/nature15516
[50]
Stringlis "MYB72-dependent coumarin exudation shapes root microbiome assembly to promote plant health" Proc. Natl. Acad. Sci. (2018) 10.1073/pnas.1722335115

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Published
Jan 01, 2024
Vol/Issue
32(1)
Pages
27-37
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Cite This Article
Jay Ram Lamichhane, Martin J. Barbetti, Martin I. Chilvers, et al. (2024). Exploiting root exudates to manage soil-borne disease complexes in a changing climate. Trends in Microbiology, 32(1), 27-37. https://doi.org/10.1016/j.tim.2023.07.011
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