Healthy microbiome: a key to successful and sustainable shrimp aquaculture

Riya Rajeev; K.K. Adithya; G. Seghal Kiran; Joseph Selvin

doi:10.1111/raq.12471

journal article Aug 18, 2020

Healthy microbiome: a key to successful and sustainable shrimp aquaculture

Riya Rajeev K.K. Adithya G. Seghal Kiran

Joseph Selvin

Reviews in Aquaculture Vol. 13 No. 1 pp. 238-258 · Wiley

View at Publisher Save 10.1111/raq.12471

Abstract

AbstractThe microbiome of the host and its surroundings play a vital role in its health and well‐being. Unlike the terrestrial organisms that maternally acquire its microbiome, the aquatic species mainly get colonized by the microorganisms in its aquatic surrounding and are exposed to a wide variety of microbial community based on the type of aquatic environment the host inhabits. This review is focused on the aquaculture and shrimp microbiome and factors that influence its microbiome such as prebiotics, probiotics, synbiotics, diet, stress conditions, frequency and type of antibiotics used, host physiological conditions and developmental stages. This review also casts light on the role of the microbiome in enhancing the shrimp health, immune response, microbial colonization, and the effects of the biofloc system on shrimp and aquaculture microbiome. Moreover, beneficial microbes can be a safer alternative to harmful antibiotics used in aquaculture, which can thereby prevent the emergence of superbugs and also enhance the production rate. A proper understanding of the interactions between the host and its microbiome can help us to modulate and manipulate the aquaculture microbiome to enhance the health of aquatic organisms, which ensures the growth of the aquaculture industry. Therefore, the treatment strategies should be targeted towards the modulation of shrimp and aquaculture microbiome, which acts as beneficial partners to overcome the challenges confronted by the aquaculture sector.

Topics

No keywords indexed for this article. Browse by subject →

References

164

[1]

10.1007/s10499-016-0108-8

[2]

10.1016/j.fsi.2015.05.038

[3]

10.1016/j.aquaculture.2013.09.051

[4]

10.1038/s41598-020-61559-1

[5]

Arisa II "The application of probiotics, prebiotics and synbiotics to enhance the immune responses of vannamei shrimp (Litopenaeus vannamei) to Vibrio harveyi infection" AACL Bioflux (2015)

[6]

10.1016/s0044-8486(99)00085-x

[7]

10.1016/j.chom.2012.10.012

[8]

10.1139/f71-232

[9]

10.1111/1751-7915.12392

[10]

Berg G "Microbiome definition re‐visited: old concepts and new challenges" Microbiome (2020)

[11]

10.1016/j.envint.2015.09.013

[12]

10.1016/j.aquaculture.2010.05.020

[13]

10.3389/fendo.2019.00009

[14]

10.1111/j.1462-2920.2006.01054.x

[15]

10.1111/1462-2920.12134

[16]

10.1016/j.ecolind.2012.12.017

[17]

10.1186/s12866-016-0770-z

[18]

10.1016/j.aquaculture.2016.03.037

[19]

10.1016/j.envint.2016.06.025

[20]

10.1371/journal.pone.0181427

[21]

Chen WY "Microbiome dynamics in a shrimp grow‐out pond with possible outbreak of acute hepatopancreatic necrosis disease" Scientific Reports (2017)

[22]

10.1016/j.fsi.2020.03.011

[23]

10.1111/are.14345

[24]

10.1007/s10499-020-00532-1

[25]

10.1038/s41598-017-11805-w

[26]

10.7717/peerj.5382

[27]

10.1016/j.aquaculture.2012.04.046

[28]

10.1016/j.fsi.2018.05.040

[29]

10.1016/j.aquaculture.2019.734802

[30]

10.1038/ismej.2013.155

[31]

10.1002/9781118897263.ch15

[32]

10.1093/femsec/fix161

[33]

10.1038/ismej.2014.84

[34]

10.1016/j.mib.2011.03.004

[35]

10.1111/1751-7915.12877

[36]

10.1016/j.fsi.2019.02.027

[37]

10.1016/j.fsi.2017.02.013

[38]

10.3389/fmicb.2018.02191

[39]

10.3389/fmicb.2018.00873

[40]

10.1111/j.1365-2109.2011.02848.x

[41]

10.1016/j.fsi.2013.10.021

[42]

10.1016/j.aquaculture.2019.02.075

[43]

10.1038/s41598-018-37042-3

[44]

FAO (2006)

[45]

FAO (2016)

[46]

FAO(2018)The State of World Fisheries and Aquaculture 2018‐Meeting the sustainable development goals. Licence: CC BY‐NC‐SA 3.0 IGO.

[47]

FAO(2020)Statistics – a quarterly update on world seafood markets. Globefish Highlights No. 1–2020. Rome.

[48]

10.1007/s10499-015-9961-0

[49]

10.3856/vol45-issue1-fulltext-16

[50]

10.1038/s41598-020-62655-y

Showing 50 of 164 references

Cited By

134

Bioremediation of aquaculture pollution by Ulva lactuca in integrated multi-trophic aquaculture (IMTA) systems: Environmental purification, pathogen control, microbial community regulation, and antibiotic resistance gene (ARG) reduction

Qianqian Zhai, Junhui Qi · 2026

Marine Pollution Bulletin

Dietary probiotic intervention strategies of Lactobacillus acidophilus and Bacillus subtilis co-cultured in Litopenaeus vannamei with low fishmeal diet: insights from immune enhancement, anti-Vibrio and ammonia nitrogen stress

Jin Li, Jin Cen · 2025

Fish & Shellfish Immunology

Engineering the fish gut microbiome: could it serve as future-proof strategy for sustainable aquaculture?

Anjaly MA, Manomi Sarasan · 2025

Blue Biotechnology

Biofloc Technology (BFT) in Aquaculture: What Goes Right, What Goes Wrong? A Scientific‐Based Snapshot

Mohammad Hossein Khanjani, Moslem Sharifinia · 2024

Aquaculture Nutrition

Algae and indigenous bacteria consortium in treatment of shrimp wastewater: A study for resource recovery in sustainable aquaculture system

Pankaj Bhatt, Paul B. Brown · 2024

Environmental Research

Host-microbiome interaction in fish and shellfish: An overview

A.D. Diwan, Sanjay N Harke · 2023

Fish and Shellfish Immunology Repor...

Intestinal Microbiota Differences in Litopenaeus vannamei Shrimp between Greenhouse and Aquaponic Rearing

Yabin Dou, Mengying Wen · 2023

Life

Proteus mirabilis ( MJA 2. 6S ) from saline‐tolerant tilapia exhibits potent antagonistic activity against Vibrio spp., enhances immunity, controls NH 3 levels and improves growth and survival in juvenile giant tiger shrimp, Penaeus monodon

Mary Jane S. Apines‐Amar, Christopher Marlowe A. Caipang · 2022

Aquaculture Research

Recent advances in bivalve-microbiota interactions for disease prevention in aquaculture

Christine Paillard, Yannick Gueguen · 2022

Current Opinion in Biotechnology

The Optimum Lipid Level for the Juvenile Redclaw Crayfish Cherax quadricarinatus: Practical Diets with Soybean Oil as the Lipid Source

Chengzhuang Chen, Chang Xu · 2022

Aquaculture Nutrition

Metrics

134

Citations

164

References

Details

Published: Aug 18, 2020
Vol/Issue: 13(1)
Pages: 238-258
License: View

Authors

R

Riya Rajeev

Department of Microbiology Pondicherry University Puducherry India

K

K.K. Adithya

Department of Food science and Technology Pondicherry University Puducherry India

G

G. Seghal Kiran

Department of Food science and Technology Pondicherry University Puducherry India

J

Joseph Selvin

Department of Microbiology Pondicherry University Puducherry India

Cite This Article

Riya Rajeev, K.K. Adithya, G. Seghal Kiran, et al. (2020). Healthy microbiome: a key to successful and sustainable shrimp aquaculture. Reviews in Aquaculture, 13(1), 238-258. https://doi.org/10.1111/raq.12471

Healthy microbiome: a key to successful and sustainable shrimp aquaculture

You May Also Like